Module 144 Residual: 0.59
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Residual Motif 1 e-value Motif 2 e-value Conditions Genes version
0.59 1.4013e-45 2.5e-18 82 31 20160204
Motif 1
e-value: 1.4013e-45
e-value: 2.5e-18
MSMEG_2955 Uncharacterized protein MSMEG_0690 Iron-sulfur cluster-binding protein (Putative iron-sulfur-binding reductase)
MSMEG_6278 Metallo-beta-lactamase superfamily protein, putative (Metallo-beta-lactamase-like protein) (EC 3.1.2.6) MSMEG_1073 Oxidoreductase, short-chain dehydrogenase/reductase family protein (Short-chain dehydrogenase/reductase SDR)
MSMEG_2492 D-lactate dehydrogenase MSMEG_6303 Carboxylic ester hydrolase (EC 3.1.1.-)
MSMEG_6610 Uncharacterized protein MSMEG_6305 Uncharacterized protein
MSMEG_6612 ATPase, MoxR family protein MSMEG_0585 L-carnitine dehydratase/bile acid-inducible protein F (EC 2.8.3.16)
MSMEG_6750 Uncharacterized protein MSMEG_0583 Probable membrane protein
MSMEG_6751 Uncharacterized protein MSMEG_5924 Uncharacterized protein
MSMEG_2490 Decarboxylase MSMEG_2380 Sugar transporter family protein
MSMEG_1803 Putative anti-sigma regulatory factor, serine/threonine protein kinase (RsbW protein) MSMEG_2381 Uncharacterized protein
MSMEG_5592 Uncharacterized protein MSMEG_2624 Ribosome maturation factor RimP
MSMEG_5590 Putative glutamate--cysteine ligase 2-3 (EC 6.3.2.2) (Gamma-glutamylcysteine synthetase 2-3) (GCS 2-3) (Gamma-GCS 2-3) MSMEG_2625 Transcription termination/antitermination protein NusA
MSMEG_1661 D-alanyl-D-alanine carboxypeptidase MSMEG_2623 Tat (Twin-arginine translocation) pathway signal sequence domain protein (Uncharacterized protein)
MSMEG_3980 Transcriptional regulator, GntR family (Transcriptional regulator, GntR family protein) MSMEG_1097 Glycosyl transferase, group 2 family protein (Putative glycosyltransferase)
MSMEG_1804 Alternate RNA polymerase sigma factor Sigf (RNA polymerase sigma-F factor) MSMEG_2622 Conserved hypothetical alanine rich protein
MSMEG_1165 UPF0234 protein MSMEG_1165/MSMEI_1134 MSMEG_4889 General substrate transporter (Integral membrane transport protein)
MSMEG_6609 Uncharacterized protein
KO_stationary.phase_rep1
Bedaquiline.vs..DMSO.30min
Biological.replicate.3.of.6..kanamycin.treatment
WT.vs..DamtR.without.N_rep2
M..smegmatis.Acid.NO.treated
Wild.type.rep2.x
Biological.replicate.4.of.6..isoniazid.treatment
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate2
dosR.WT_Replicate1
Biological.replicate.5.of.6..negative.control
KO_log.phase_rep2
Plogcy5plogcy3slide110norm
Biological.replicate.7.of.7..falcarinol.treatment
MB100pruR.vs..MB100.rep.2
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
rel.knockout.rep2
Bedaquiline.vs..DMSO..45min
Biological.replicate.6.of.6..negative.control
Biological.replicate.6.of.7..falcarinol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
Biological.replicate.2.of.6..kanamycin.treatment
X0.6..vs..50..air.saturation.Replicate.3
Sub.MIC.INH
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
Biological.replicate.6.of.7..ethambutol.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
mc2155.vs.Dcrp1.replicate.2
Biological.replicate.5.of.6..kanamycin.treatment
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.7..panaxydol.treatment
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
dcpA.knockout.rep2
dcpA.knockout.rep1
Biological.replicate.2.of.6..isoniazid.treatment
Biological.replicate.2.of.7..falcarinol.treatment
stphcy5plogcy3slide580norm
WT_log.phase_rep2
WT.with.vs..without.N_dye.swap_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
WT_stationary.phase_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.5.of.7..ethambutol.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Bedaquiline.vs..DMSO.60min
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Biological.replicate.3.of.7..falcarinol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
dosR.WT_Replicate3
X4dbfcy5plogcy3slide480norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.1.of.6..negative.control
Biological.replicate.1.of.7..falcarinol.treatment
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
Biological.replicate.4.of.6..kanamycin.treatment
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
WT.vs..DamtR.N.surplus_rep2
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