Module 151 Residual: 0.48
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Residual Motif 1 e-value Motif 2 e-value Conditions Genes version
0.48 2.5e-18 0.000000017 77 22 20160204
Motif 1
e-value: 2.5e-18
e-value: 0.000000017
MSMEG_5898 MCE-family protein MCE4c (Virulence factor Mce family protein) MSMEG_4715 Acyl-CoA dehydrogenase (EC 1.3.99.-) (Acyl-CoA dehydrogenase FadE19) (EC 1.3.8.1)
MSMEG_5899 MCE-family protein MCE4b (Virulence factor Mce family protein) MSMEG_2009 Regulatory protein GntR, HTH:GntR (Transcriptional regulator, GntR family)
MSMEG_5896 Virulence factor Mce family protein MSMEG_2007 Putative HpcE protein
MSMEG_5897 MCE-family protein MCE4d (Virulence factor mce family protein) MSMEG_3523 Probable membrane protein (Uncharacterized protein)
MSMEG_5894 Uncharacterized protein MSMEG_3414 Uncharacterized protein
MSMEG_5895 MCE-family protein MCE4f (Virulence factor mce family protein) MSMEG_3415 MarR-family protein regulatory protein
MSMEG_5893 Conserved MCE-associated protein (Uncharacterized protein) MSMEG_6536 Carboxymuconolactone decarboxylase (EC 4.1.1.44)
MSMEG_4718 Transcriptional regulator, TetR family protein MSMEG_6537 Transcriptional regulator, TetR family protein
MSMEG_4713 HpcH/HpaI aldolase/citrate lyase family protein (Putative citrate lyase (Beta subunit)) (EC 4.1.3.6) MSMEG_5900 Virulence factor Mce family protein
MSMEG_4716 Acetyl-/propionyl-coenzyme A carboxylase alpha chain (EC 6.3.4.14) MSMEG_5901 TrnB2 protein
MSMEG_4717 Acetyl-/propionyl-CoA carboxylase (Beta subunit) AccD1 (EC 6.4.1.3) (Carboxyl transferase domain protein) MSMEG_5902 Conserved hypothetical integral membrane protein Yrbe4a (Uncharacterized protein)
Bedaquiline.vs..DMSO.30min
WT.vs..DamtR.without.N_rep1
Biological.replicate.2.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.15min
Mycobacterium.smegmatis.Spheroplast.induced
Wild.type.rep2.x
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.4.of.6..isoniazid.treatment
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate2
KO_log.phase_rep2
KO_log.phase_rep1
Wild.type.rep1.y
Biological.replicate.7.of.7..falcarinol.treatment
MB100pruR.vs..MB100.rep.4
Biological.replicate.3.of.7..panaxydol.treatment
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
rel.knockout.rep1
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.1
WT_log.phase_rep2
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
WT.vs..DamtR.N.surplus_rep2
WT.vs..DamtR.N.surplus_rep1
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
mc2155.vs.Dcrp1.replicate.2
stphcy5plogcy3slide487norm
mc2155.vs.Dcrp1.replicate.1
X3dbfcy3plogcy5slide607norm
mc2155.vs.Dcrp1.replicate.4
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
Biological.replicate.2.of.7..falcarinol.treatment
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.2
Biological.replicate.2.of.6..kanamycin.treatment
Biological.replicate.3.of.6..kanamycin.treatment
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
mc2155.vs.Dcrp1.replicate.3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Slow.vs..Fast.Replicate.5
Bedaquiline.vs..DMSO.60min
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
X4dbfcy5plogcy3slide480norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.1.of.7..panaxydol.treatment
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..negative.control
Biological.replicate.4.of.6..kanamycin.treatment
Biological.replicate.5.of.6..kanamycin.treatment
X4dbfcy3plogcy5slide903norm
Log in to post comments