Module 153 Residual: 0.42
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.42 | 0.0000000000000011 | 0.00036 | 84 | 21 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000000000000011 | |
| Motif 2 |
 |
| e-value: 0.00036 |
| MSMEG_3927 Hydrogenase maturation protease (Peptidase M52, hydrogen uptake protein) | MSMEG_6566 Uncharacterized protein |
| MSMEG_2388 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (Isopropylmalate isomerase) | MSMEG_6565 Uncharacterized protein |
| MSMEG_2387 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (Isopropylmalate isomerase) | MSMEG_2386 Transcriptional regulator (Bacterial regulatory proteins, IclR family) (Transcriptional regulator, IclR family protein) |
| MSMEG_1125 Regulatory protein, ArsR (Transcriptional regulator) | MSMEG_4154 Transposase mutator type (Transposase, Mutator family protein) |
| MSMEG_4153 Cytochrome P450 | MSMEG_6813 Amidohydrolase 2 (Uncharacterized protein) |
| MSMEG_1124 4Fe-4S ferredoxin, iron-sulfur binding protein (Putative ferredoxin FdxA) | MSMEG_3926 ATPase, P-type (Transporting), HAD superfamily, subfamily IC (EC 3.6.3.8) (Cation-transporting ATPase Pma1) (EC 3.6.3.-) |
| MSMEG_3930 [NiFe] hydrogenase, gamma subunit, putative | MSMEG_6568 Regulatory protein, LuxR, putative (Transcriptional regulator, LuxR family) |
| MSMEG_3932 14 kDa antigen (Heat shock protein hspX) | MSMEG_4151 Conserved domain protein (Fe3S4 ferredoxin) |
| MSMEG_3931 [NiFe] hydrogenase, beta subunit, putative | MSMEG_4152 Phenoxybenzoate dioxygenase beta subunit (EC 1.-.-.-) |
| MSMEG_6814 Helix-turn-helix, Fis-type | MSMEG_3929 NADH ubiquinone oxidoreductase 20 kDa subunit ([NiFe] hydrogenase, delta subunit, putative) |
| MSMEG_3928 Nickel-dependent hydrogenase, large subunit (EC 1.12.-.-) ([NiFe] hydrogenase, alpha subunit, putative) |
WT.vs..DamtR.without.N_rep1
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.4.of.6..negative.control
dcpA.knockout.rep2
Mycobacterium.smegmatis.Spheroplast.induced
dosR.WT_Replicate4
Biological.replicate.4.of.7..ethambutol.treatment
Bedaquiline.vs..DMSO.15min
dosR.WT_Replicate2
dosR.WT_Replicate1
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Plogcy5plogcy3slide110norm
Wild.type.rep1.x
DglnR_without.vs..with.N_rep1
MB100pruR.vs..MB100.rep.4
Biological.replicate.3.of.7..panaxydol.treatment
MB100pruR.vs..MB100.rep.2
DglnR_without.vs..with.N_rep2
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
Wild.type.rep3
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..panaxydol.treatment
WT.vs..DamtR.without.N_rep2
M..smegmatis.Acid.NO.treated
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.4.of.6..kanamycin.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
X0.6..vs..50..air.saturation.Replicate.1
X3dbfcy5plogcy3slide601norm
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
WT.vs..DamtR.N.surplus_rep1
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
mc2155.vs.Dcrp1.replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
Biological.replicate.5.of.6..kanamycin.treatment
X3dbfcy3plogcy5slide607norm
mc2155.vs.Dcrp1.replicate.4
WT.vs..DamtR.N.surplus_rep2
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
Biological.replicate.2.of.6..isoniazid.treatment
Biological.replicate.2.of.7..falcarinol.treatment
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
WT_log.phase_rep2
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.2
WT.with.vs..without.N_dye.swap_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X4XR.rep2
Biological.replicate.2.of.7..ethambutol.treatment
X4XR.rep1
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Biological.replicate.3.of.6..kanamycin.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
Biological.replicate.5.of.6..negative.control
X3dbfcy5plogcy3slide603norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
Wild.type.rep2.x
WT.vs..DamtR.N.surplus_.dyeswap_rep1
Biological.replicate.1.of.7..panaxydol.treatment
WT.vs..DamtR.N.surplus_dyeswap_rep2
DglnR_without.vs..with.N_dyeswap_rep1
Wild.type.rep1.y
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
Plogcy5plogcy3slide113norm
Biological.replicate.2.of.6..kanamycin.treatment
Biological.replicate.3.of.6..negative.control
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