Module 194 Residual: 0.52
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.52 | 360 | 3100 | 80 | 29 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 360 | |
| Motif 2 |
 |
| e-value: 3100 |
| MSMEG_2849 Transcriptional regulator, HxlR family (Transcriptional regulatory protein) | MSMEG_3041 Putative transferase (Thiopurine S-methyltransferase (Tpmt) superfamily protein) |
| MSMEG_3725 Coenzyme PQQ biosynthesis protein A (Uncharacterized protein) | MSMEG_4348 Acetolactate synthase large subunit (Thiamine pyrophosphate enzyme-like TPP-binding protein) (EC 2.2.1.6) |
| MSMEG_2198 ThiF family protein (UBA/THIF-type NAD/FAD binding fold protein) | MSMEG_4025 Transcriptional regulator, LysR family (Transcriptional regulator, LysR family protein) |
| MSMEG_0708 LysR family regulatory protein (Transcriptional regulator, LysR family protein) | MSMEG_3434 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) |
| MSMEG_0983 Two-component system response regulator | MSMEG_0423 Uncharacterized protein |
| MSMEG_4999 Bacterial extracellular solute-binding protein, family protein 5 (Uncharacterized protein) | MSMEG_4144 LysR family regulatory protein (Transcriptional regulator, LysR family protein) |
| MSMEG_6338 Phosphoglycerate mutase (EC 5.4.2.-) (Phosphoglycerate mutase family protein, putative) | MSMEG_6684 Agarase (EC 3.2.1.81) |
| MSMEG_0577 Major facilitator superfamily MFS_1 (Major facilitator superfamily protein, putative) | MSMEG_0890 HD domain protein (Metal dependent phosphohydrolase) (EC 4.2.1.69) |
| MSMEG_0578 Acyl-CoA dehydrogenase (Acyl-CoA dehydrogenase, middle domain protein) | MSMEG_0894 Dihydrodipicolinate reductase (SAF domain protein) (EC 1.1.1.3) |
| MSMEG_3963 Uncharacterized protein | MSMEG_0580 Uncharacterized protein |
| MSMEG_1683 Cytosine/purine/uracil/thiamine/allantoin permease family protein (Permease for cytosine/purines uracil thiamine allantoin) | MSMEG_4190 Inositol monophosphatase family protein (Putative inositol monophosphatase CysQ) |
| MSMEG_6337 Acyl-CoA dehydrogenase FadE36 (Phosphotransferase enzyme family protein) | MSMEG_3484 Cupin domain protein (Uncharacterized protein) |
| MSMEG_0156 Transcriptional regulator, LysR family protein | MSMEG_0163 Uncharacterized protein |
| MSMEG_5287 Alcohol dehydrogenase (EC 1.1.1.1) (Dehydrogenase) | MSMEG_2466 Acyl CoA dehydrogenase (Glutaryl-CoA dehydrogenase) (EC 1.3.8.6) |
| MSMEG_3733 Uncharacterized protein |
KO_stationary.phase_rep2
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.4.of.6..negative.control
dcpA.knockout.rep2
Mycobacterium.smegmatis.Spheroplast.induced
Biological.replicate.2.of.6..isoniazid.treatment
Bedaquiline.vs..DMSO.30min
Biological.replicate.4.of.6..isoniazid.treatment
MB100pruR.vs..MB100..rep.3
KO_log.phase_rep1
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Wild.type.rep1.x
DglnR_without.vs..with.N_rep1
MB100pruR.vs..MB100.rep.4
MB100pruR.vs..MB100.rep.2
Biological.replicate.2.of.7..panaxydol.treatment
MB100pruR.vs..MB100.rep.1
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
rel.knockout.rep1
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.6..negative.control
Biological.replicate.6.of.7..panaxydol.treatment
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
X0.6..vs..50..air.saturation.Replicate.1
WT_log.phase_rep2
X0.6..vs..50..air.saturation.Replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
WT.vs..DamtR.N.surplus_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
stphcy5plogcy3slide487norm
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.2.of.7..ethambutol.treatment
mc2155.vs.Dcrp1.replicate.4
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
Sub.MIC.INH
stphcy5plogcy3slide580norm
X3dbfcy5plogcy3slide601norm
X2.5..vs..50..air.saturation.Replicate.5
X3dbfcy3plogcy5slide607norm
X4dbfcy5plogcy3slide480norm
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep2
X4XR.rep2
X4XR.rep1
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
Bedaquiline.vs..DMSO.60min
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
Biological.replicate.5.of.6..negative.control
X3dbfcy5plogcy3slide603norm
X4dbfcy5plogcy3slide901norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.with.vs..without.N_rep2
X4dbfcy3plogcy5slide903norm
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Biological.replicate.7.of.7..panaxydol.treatment
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
WT.vs..DglnR.N_starvation_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
Plogcy5plogcy3slide113norm
BatchCulture_LBTbroth_StationaryPhase_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.1.of.6..kanamycin.treatment
Bedaquiline.vs..DMSO.120min
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