Module 202 Residual: 0.59
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.59 | 5.1e-39 | 0.0000000000000048 | 79 | 30 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 5.1e-39 | |
| Motif 2 |
 |
| e-value: 0.0000000000000048 |
| MSMEG_4779 Probable regulatory protein (Transcriptional regulator, TetR family) | MSMEG_4057 Transcriptional regulator, GntR family protein |
| MSMEG_5245 Universal stress protein family protein (UspA) | MSMEG_2292 |
| MSMEG_1953 Transcriptional regulator WhiB7 | MSMEG_4780 Cytochrome P450 (Cytochrome p450) |
| MSMEG_5244 LuxR family two-component response regulator (Two component transcriptional regulatory protein devr) | MSMEG_0698 Isoniazid inducible protein IniC (Isoniazid inductible protein IniC) |
| MSMEG_4033 TetR-family protein transcriptional regulator (Transcriptional regulator, TetR family) | MSMEG_6141 D-amino acid aminohydrolase (EC 3.5.1.82) (N-acyl-D-glutamate amidohydrolase) |
| MSMEG_4032 Zinc-binding alcohol dehydrogenase | MSMEG_3324 Uncharacterized protein |
| MSMEG_2571 Cupin 2, conserved barrel (Uncharacterized protein) | MSMEG_0697 Integral membrane protein |
| MSMEG_5246 Uncharacterized protein | MSMEG_0696 Alanine-rich protein (Uncharacterized protein) |
| MSMEG_5083 Uncharacterized protein | MSMEG_4829 Cytochrome P450 |
| MSMEG_5082 DNA-3-methyladenine glycosylase (DNA-3-methyladenine glycosylase I) (EC 3.2.2.20) | MSMEG_4165 Benzaldehyde dehydrogenase II (EC 1.2.1.28) ([NAD+] benzaldehyde dehydrogenase) |
| MSMEG_6139 Putative HTH-type transcriptional regulator (Transcriptional regulatory protein (Probably TetR-family)) | MSMEG_1390 Enoyl-CoA hydratase (Enoyl-CoA hydratase/isomerase) (EC 4.2.1.17) |
| MSMEG_6796 Uncharacterized protein | MSMEG_0673 Uncharacterized protein |
| MSMEG_1387 Acyl-CoA dehydrogenase (Putative acyl-CoA dehydrogenase) | MSMEG_0633 PAP2 superfamily protein (Phosphoesterase PA-phosphatase related protein) |
| MSMEG_1388 Enoyl-CoA hydratase (Enoyl-CoA hydratase EchA4) (EC 4.2.1.17) | MSMEG_0485 Amidase (EC 3.5.1.4) |
| MSMEG_1389 Uncharacterized protein | MSMEG_0107 Cell envelope-related function transcriptional attenuator common domain (Putative transcriptional regulator) |
KO_stationary.phase_rep2
WT.vs..DglnR.N_starvation_rep2
WT.vs..DamtR.without.N_rep1
X4XR.rep1
WT.vs..DamtR.without.N_rep2
Mycobacterium.smegmatis.Spheroplast.induced
dosR.WT_Replicate4
Biological.replicate.1.of.6..negative.control
dosR.WT_Replicate3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
DglnR_without.vs..with.N_rep1
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
MB100pruR.vs..MB100.rep.2
DglnR_without.vs..with.N_rep2
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.5.of.7..panaxydol.treatment
WT.with.vs..without.N_dye.swap_rep1
rel.knockout.rep2
rel.knockout.rep1
Biological.replicate.6.of.6..negative.control
Biological.replicate.6.of.7..falcarinol.treatment
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.3.of.6..isoniazid.treatment
Biological.replicate.5.of.7..falcarinol.treatment
X0.6..vs..50..air.saturation.Replicate.5
WT.vs..DamtR.N.surplus_rep2
Biological.replicate.2.of.7..falcarinol.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.3.of.6..negative.control
dcpA.knockout.rep2
dcpA.knockout.rep1
Plogcy5plogcy3slide111norm
Biological.replicate.2.of.6..isoniazid.treatment
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
Biological.replicate.2.of.6..negative.control
X4XR.rep2
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.4.of.7..falcarinol.treatment
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.4.of.6..negative.control
X3dbfcy5plogcy3slide603norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
X4dbfcy5plogcy3slide901norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
WT.with.vs..without.N_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep1
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
BatchCulture_LBTbroth_StationaryPhase_Replicate2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
X4dbfcy3plogcy5slide903norm
dosR.WT_Replicate2
Bedaquiline.vs..DMSO.120min
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