Module 204 Residual: 0.48
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.48 | 0.0000000000000096 | 0.00000000053 | 80 | 28 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000000000000096 | |
| Motif 2 |
 |
| e-value: 0.00000000053 |
| MSMEG_1596 Transcriptional regulator (Transcriptional regulator, TetR family) | MSMEG_5625 Cyclododecanone monooxygenase (Cyclohexanone monooxygenase) (EC 1.14.13.22) |
| MSMEG_1595 Putative oxidoreductase (EC 1.-.-.-) (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.100) | MSMEG_5721 Acetyl-CoA acetyltransferase (Acetyl-CoA acyltransferase/thiolase) (EC 2.3.1.16) |
| MSMEG_5632 Oxidoreductase, short chain dehydrogenase/reductase family protein (Short-chain dehydrogenase/reductase SDR) | MSMEG_5627 Rieske (2Fe-2S) region (EC 1.14.12.12) (Rieske [2Fe-2S] domain protein) |
| MSMEG_5633 AMP-dependent synthetase and ligase (EC 6.2.1.3) (Feruloyl-CoA synthetase) | MSMEG_5626 Luciferase (Luciferase-like monooxygenase) (EC 1.14.14.3) |
| MSMEG_5630 Transcriptional regulator, GntR family protein (Transcriptional regulatory protein (Probably GntR-family)) | MSMEG_5629 Uncharacterized protein |
| MSMEG_5631 AMP-dependent synthetase and ligase (EC 6.2.1.26) | MSMEG_5628 Oxidoreductase, short chain dehydrogenase/reductase family protein (Short-chain dehydrogenase/reductase SDR) |
| MSMEG_5300 Short-chain dehydrogenase/reductase SDR (EC 1.1.1.100) (Short-chain type dehydrogenase/reductase) (EC 1.-.-.-) | MSMEG_1153 FAD dependent oxidoreductase |
| MSMEG_5301 Transcriptional regulator (Transcriptional regulator, TetR family) | MSMEG_1152 Citrate-proton symporter |
| MSMEG_4408 Integral membrane protein (Putative membrane spanning protein) | MSMEG_1157 Short chain dehydrogenase (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.100) |
| MSMEG_4409 Uncharacterized protein | MSMEG_1156 Dihydrodipicolinate synthetase (EC 4.3.3.7) |
| MSMEG_1477 Major facilitator superfamily protein | MSMEG_1155 Carnitinyl-CoA dehydratase (EC 4.2.1.-) (Enoyl-CoA hydratase/isomerase) (EC 4.2.1.17) |
| MSMEG_2000 Uncharacterized protein | MSMEG_1154 Formyl-coenzyme A transferase (EC 2.8.3.16) (L-carnitine dehydratase/bile acid-inducible protein F) |
| MSMEG_1307 EthD protein (Putative ethyl tert-butyl ether degradation protein EthD) | MSMEG_3586 Major facilitator family protein transporter (Major facilitator superfamily MFS_1) |
| MSMEG_3275 RNA polymerase sigma factor, sigma-70 family protein | MSMEG_1158 5-oxovalerate dehydrogenase (Aldehyde dehydrogenase) (EC 1.2.1.-) |
KO_stationary.phase_rep1
Bedaquiline.vs..DMSO.30min
Biological.replicate.5.of.7..falcarinol.treatment
X4XR.rep1
WT.vs..DamtR.without.N_rep2
Mycobacterium.smegmatis.Spheroplast.induced
Plogcy5plogcy3slide110norm
Biological.replicate.1.of.6..negative.control
MB100pruR.vs..MB100..rep.3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Biological.replicate.2.of.6..kanamycin.treatment
Wild.type.rep2.y
Biological.replicate.7.of.7..falcarinol.treatment
Wild.type.rep1.x
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
MB100pruR.vs..MB100.rep.2
WT.vs..DamtR.without.N_.dyeswap_rep1
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.6..kanamycin.treatment
rel.knockout.rep1
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.5.of.6..isoniazid.treatment
Biological.replicate.6.of.7..falcarinol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
X0.6..vs..50..air.saturation.Replicate.1
Sub.MIC.INH
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
WT.vs..DamtR.N.surplus_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
stphcy5plogcy3slide487norm
Biological.replicate.5.of.6..kanamycin.treatment
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
WT.vs..DamtR.N.surplus_rep2
dcpA.knockout.rep2
dcpA.knockout.rep1
Biological.replicate.2.of.6..isoniazid.treatment
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
Slow.vs..Fast.Replicate.2
stphcy3plogcy5slide581norm
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.2
WT_stationary.phase_rep2
X4XR.rep2
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.4.of.7..falcarinol.treatment
WT.vs..DamtR.N.surplus_dyeswap_rep2
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.7.of.7..panaxydol.treatment
Biological.replicate.4.of.6..negative.control
X4dbfcy5plogcy3slide480norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
Wild.type.rep3
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.vs..DglnR.N_starvation_rep1
WT.vs..DamtR.N.surplus_.dyeswap_rep1
X2XR.rep1
X2XR.rep2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
WT.vs..DglnR.N_starvation_dye.swap_rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
Biological.replicate.2.of.6..negative.control
Biological.replicate.4.of.6..kanamycin.treatment
Biological.replicate.3.of.6..negative.control
X4dbfcy3plogcy5slide903norm
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.120min
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