Module 205 Residual: 0.55Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Summary

Residual	Motif 1 e-value	Motif 2 e-value	Conditions	Genes	version
0.55	0.00000018	0.000013	78	35	20160204

Motifs

Motif 1
	e-value: 0.00000018
Motif 2
	e-value: 0.000013

Module Plots

Members

MSMEG_1917 Biotinylated protein TB7.3 homolog	MSMEG_5497 Uncharacterized protein
MSMEG_5733 Putative universal stress protein UspA (Universal stress protein family protein)	MSMEG_2947 Cyclase (Polyketide cyclase)
MSMEG_0894 Dihydrodipicolinate reductase (SAF domain protein) (EC 1.1.1.3)	MSMEG_2948 6-oxocamphor hydrolase
MSMEG_1844 Uncharacterized protein	MSMEG_1309 Uncharacterized protein
MSMEG_1649 FAD dependent oxidoreductase (Monooxygenase FAD-binding protein) (EC 1.14.13.50)	MSMEG_0548 Chromosome replication initiation inhibitor protein (Transcriptional regulator, LysR family)
MSMEG_5715 Luciferase-like protein (Uncharacterized protein)	MSMEG_1617 Kumamolisin (Peptidase S8 and S53, subtilisin, kexin, sedolisin) (EC 3.4.21.101)
MSMEG_5717 Pyridoxamine 5'-phosphate oxidase family protein (Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein)	MSMEG_0543 Conserved hypothetical membrane protein (Uncharacterized protein)
MSMEG_1646 23S rRNA methyltransferase (Ribosomal RNA adenine dimethylase family protein)	MSMEG_6577 Methylmalonyl-CoA carboxyltransferase 12S subunit (EC 2.1.3.1)
MSMEG_0438 Periplasmic binding protein (Periplasmic iron-transport lipoprotein)	MSMEG_0546 Methyltransferase type 11 (Uncharacterized protein)
MSMEG_4224 Uncharacterized protein	MSMEG_1401 Elongation factor Tu (EF-Tu)
MSMEG_2632 Methyltransferase type 11 (SAM-dependent methyltransferase)	MSMEG_6306 Glutamyl-Q tRNA(Asp) synthetase (Glu-Q-RSs) (EC 6.1.1.-)
MSMEG_0057 Uncharacterized protein	MSMEG_0060 Putative conserved membrane protein (Uncharacterized protein)
MSMEG_0056 Uncharacterized protein	MSMEG_0061 Ftsk/spoiiie family protein (Uncharacterized protein)
MSMEG_0059 ATPase, AAA family protein	MSMEG_0062 Cell division FtsK/SpoIIIE (Ftsk/spoiiie family protein)
MSMEG_0058 Uncharacterized protein	MSMEG_5348 Medium chain fatty-acid-CoA ligase FadD14 (EC 2.3.1.86) (Medium-chain fatty acid-CoA ligase)
MSMEG_0249 Conserved transmembrane protein (Integral membrane protein)	MSMEG_3950 Universal stress protein MSMEG_3950/MSMEI_3859 (USP MSMEG_3950)
MSMEG_3653 Uncharacterized protein	MSMEG_0893 Uncharacterized protein
MSMEG_6083 A/G-specific adenine glycosylase (EC 3.2.2.-)

Conditions

KO_stationary.phase_rep1

KO_stationary.phase_rep2

Biological.replicate.5.of.7..falcarinol.treatment

Biological.replicate.4.of.6..negative.control

Bedaquiline.vs..DMSO.15min

M..smegmatis.Acid.NO.treated

Mycobacterium.smegmatis.Spheroplast.induced

Wild.type.rep2.x

Wild.type.rep1.x

Biological.replicate.4.of.6..isoniazid.treatment

MB100pruR.vs..MB100..rep.3

Tet.CarD.vs.Control..Replicates.1..2..and.3.

dosR.WT_Replicate1

KO_log.phase_rep1

Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.

X3dbfcy5plogcy3slide601norm

Wild.type.rep1.y

Biological.replicate.3.of.7..panaxydol.treatment

Biological.replicate.6.of.6..negative.control

Biological.replicate.1.of.6..isoniazid.treatment

Biological.replicate.1.of.7..ethambutol.treatment

Biological.replicate.6.of.6..kanamycin.treatment

rel.knockout.rep2

Bedaquiline.vs..DMSO..45min

Biological.replicate.5.of.6..isoniazid.treatment

Biological.replicate.6.of.7..falcarinol.treatment

DamtR.with.vs..DamtR.without.N_.rep1

Biological.replicate.3.of.7..ethambutol.treatment

Biological.replicate.4.of.6..kanamycin.treatment

WT.vs..DglnR.N_starvation_dye.swap_rep1

WT_log.phase_rep2

M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1

Slow.vs..Fast.Replicate.2

M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3

mc2155.vs.Dcrp1.replicate.2

mc2155.vs.Dcrp1.replicate.3

mc2155.vs.Dcrp1.replicate.1

X3dbfcy3plogcy5slide607norm

X0.6..vs..50..air.saturation.Replicate.4

Biological.replicate.5.of.7..panaxydol.treatment

Biological.replicate.2.of.7..falcarinol.treatment

Plogcy5plogcy3slide111norm

stphcy5plogcy3slide580norm

X2.5..vs..50..air.saturation.Replicate.4

stphcy3plogcy5slide581norm

WT_log.phase_rep1

X2.5..vs..50..air.saturation.Replicate.1

X2.5..vs..50..air.saturation.Replicate.2

WT.with.vs..without.N_dye.swap_rep2

WT.vs..DamtR.N.surplus_rep2

WT_stationary.phase_rep2

WT_stationary.phase_rep1

Biological.replicate.5.of.7..ethambutol.treatment

Slow.vs..Fast.Replicate.4

Slow.vs..Fast.Replicate.5

Bedaquiline.vs..DMSO.60min

Biological.replicate.4.of.7..falcarinol.treatment

Slow.vs..Fast.Replicate.1

Biological.replicate.6.of.7..ethambutol.treatment

Biological.replicate.7.of.7..panaxydol.treatment

X4dbfcy5plogcy3slide480norm

Biological.replicate.5.of.6..kanamycin.treatment

mc2155.pMind..vs.mc2155.pMind.6189.replicate.2

X4dbfcy5plogcy3slide901norm

BatchCulture_LBTbroth_ExponentialPhase_Replicate4

WT.vs..DamtR.N.surplus_dyeswap_rep2

Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.

WT.with.vs..without.N_rep1

X2XR.rep2

DglnR_without.vs..with.N_dyeswap_rep1

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3

Sub.MIC.INH

Plogcy5plogcy3slide113norm

M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3

M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1

Biological.replicate.3.of.6..negative.control

Biological.replicate.6.of.7..panaxydol.treatment

Bedaquiline.vs..DMSO.120min

Comments