Module 234 Residual: 0.50
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.50 | 3.2e-30 | 0.00000056 | 85 | 21 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 3.2e-30 | |
| Motif 2 |
 |
| e-value: 0.00000056 |
| MSMEG_3905 Uncharacterized protein | MSMEG_5547 Integral membrane protein (Uncharacterized protein) |
| MSMEG_3904 LppK (LppK protein) | MSMEG_3759 Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-) |
| MSMEG_5432 Peptidyl-tRNA hydrolase (PTH) (EC 3.1.1.29) | MSMEG_4743 Uncharacterized protein |
| MSMEG_5646 Uncharacterized protein | MSMEG_4742 Clavaldehyde dehydrogenase |
| MSMEG_1360 Endonuclease/exonuclease/phosphatase | MSMEG_3902 Proteasome-associated ATPase (AAA ATPase forming ring-shaped complexes) (ARC) (Mycobacterial proteasome ATPase) |
| MSMEG_6547 Amidohydrolase (Amidohydrolase 2) | MSMEG_4996 ABC oligopeptide transporter, permease component (ABC transporter, permease protein OppC) |
| MSMEG_4995 Oligopeptide transport system permease protein AppB (Oligopeptide-transport integral membrane protein ABC transporter OppB) | MSMEG_6546 Transcriptional regulatory protein |
| MSMEG_6451 Transcriptional regulator, ArsR family protein | MSMEG_5431 50S ribosomal protein L25 (General stress protein CTC) |
| MSMEG_4997 ABC transporter, ATP-binding protein OppD (Oligopeptide/dipeptide ABC transporter) | MSMEG_3760 Uncharacterized protein |
| MSMEG_4744 Uncharacterized protein | MSMEG_3758 Tyrosine--tRNA ligase (EC 6.1.1.1) |
| MSMEG_2511 Siderophore utilization protein (Siderophore-interacting protein) |
Wild.type.rep2.x
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
Biological.replicate.2.of.7..panaxydol.treatment
WT.vs..DamtR.without.N_rep2
dosR.WT_Replicate4
Biological.replicate.4.of.7..ethambutol.treatment
Bedaquiline.vs..DMSO.30min
X2XR.rep1
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate2
Biological.replicate.2.of.6..negative.control
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
KO_log.phase_rep2
KO_log.phase_rep1
Plogcy5plogcy3slide110norm
Wild.type.rep1.x
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep1
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.2.of.7..falcarinol.treatment
Wild.type.rep3
Bedaquiline.vs..DMSO..45min
MB100pruR.vs..MB100.rep.2
Biological.replicate.1.of.6..negative.control
M..smegmatis.Acid.NO.treated
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
X0.6..vs..50..air.saturation.Replicate.1
X3dbfcy5plogcy3slide601norm
Biological.replicate.4.of.6..kanamycin.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.vs..DamtR.N.surplus_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
mc2155.vs.Dcrp1.replicate.3
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.2.of.7..ethambutol.treatment
mc2155.vs.Dcrp1.replicate.4
Biological.replicate.5.of.7..panaxydol.treatment
WT.vs..DamtR.N.surplus_rep1
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
stphcy3plogcy5slide581norm
X2.5..vs..50..air.saturation.Replicate.1
Biological.replicate.5.of.6..isoniazid.treatment
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.2.of.6..isoniazid.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Bedaquiline.vs..DMSO.60min
Biological.replicate.4.of.7..falcarinol.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
Slow.vs..Fast.Replicate.3
Biological.replicate.5.of.6..negative.control
X3dbfcy5plogcy3slide603norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.vs..DglnR.N_starvation_rep1
WT.vs..DglnR.N_starvation_rep2
DglnR_without.vs..with.N_dyeswap_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.1.of.7..falcarinol.treatment
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
WT.vs..DamtR.N.surplus_dyeswap_rep2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Plogcy5plogcy3slide113norm
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Bedaquiline.vs..DMSO.120min
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