Module 236 Residual: 0.57
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.57 | 8.4e-20 | 0.000002 | 77 | 34 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 8.4e-20 | |
| Motif 2 |
 |
| e-value: 0.000002 |
| MSMEG_3282 Uncharacterized protein | MSMEG_3296 ECF-family protein sigma factor H |
| MSMEG_4503 Uncharacterized protein | MSMEG_3294 Uncharacterized protein |
| MSMEG_2034 Aryl-alcohol dehydrogenase (EC 1.1.1.90) | MSMEG_3416 Putative permease of the drug/metabolite transporter (DMT) superfamily (Uncharacterized protein) |
| MSMEG_6549 Uncharacterized protein | MSMEG_1836 Mannose-6-phosphate isomerase, class I (EC 5.3.1.8) |
| MSMEG_4014 Amidase, hydantoinase/carbamoylase (EC 3.5.1.87) (N-carbamoyl-L-amino acid amidohydrolase) | MSMEG_6551 Uncharacterized protein |
| MSMEG_4017 BmyD protein (Uncharacterized protein) | MSMEG_6342 Oxidoreductase |
| MSMEG_4016 Uncharacterized protein | MSMEG_6341 6-phosphogluconate dehydrogenase NAD-binding protein (6-phosphogluconate dehydrogenase, NAD-binding) |
| MSMEG_4058 Major facilitator superfamily protein | MSMEG_5820 Uncharacterized protein |
| MSMEG_1747 RNA polymerase sigma factor | MSMEG_2265 Uncharacterized protein |
| MSMEG_3855 Uncharacterized protein | MSMEG_3244 Uncharacterized protein |
| MSMEG_5570 Multifunctional non-homologous end joining protein LigD (NHEJ DNA polymerase) [Includes: DNA repair polymerase (Pol) (Polymerase/primase); 3'-phosphoesterase (3'-ribonuclease/3'-phosphatase) (PE); DNA ligase (Lig) (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])] | MSMEG_4426 NmrA-like protein (Secreted protein) |
| MSMEG_1331 Enoyl-CoA hydratase (Enoyl-CoA hydratase EchA3) (EC 4.2.1.17) | MSMEG_1687 Uncharacterized protein |
| MSMEG_6005 Uncharacterized protein | MSMEG_5142 Beta-glucosidase (EC 3.2.1.21) |
| MSMEG_6838 Putative esterase | MSMEG_5446 Para-aminobenzoate synthase, component I (EC 4.1.3.-) (Para-aminobenzoate synthase, subunit I) (EC 2.6.1.85) |
| MSMEG_6836 Oxidoreductase FAD-binding domain protein (Putative oxidoreductase) | MSMEG_1210 Uncharacterized protein |
| MSMEG_2736 GTPase HflX (GTP-binding protein HflX) | MSMEG_3600 Uncharacterized protein |
| MSMEG_3278 Uncharacterized protein | MSMEG_6820 5'-nucleotidase surE (EC 3.1.3.5) (Acid phosphatase SurE) (EC 3.1.3.2) |
Biological.replicate.5.of.7..falcarinol.treatment
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
X4XR.rep1
dcpA.knockout.rep2
M..smegmatis.Acid.NO.treated
Mycobacterium.smegmatis.Spheroplast.induced
Wild.type.rep2.x
X2XR.rep1
Tet.CarD.vs.Control..Replicates.1..2..and.3.
KO_log.phase_rep2
Wild.type.rep2.y
DglnR_without.vs..with.N_rep1
Wild.type.rep1.x
Biological.replicate.7.of.7..falcarinol.treatment
DglnR_without.vs..with.N_rep2
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.5.of.6..isoniazid.treatment
Biological.replicate.6.of.7..falcarinol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.4.of.6..kanamycin.treatment
DamtR.with.vs..DamtR.without.N_.rep2
WT_log.phase_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.3
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.1.of.7..panaxydol.treatment
Biological.replicate.3.of.6..negative.control
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
Plogcy5plogcy3slide111norm
Biological.replicate.2.of.6..isoniazid.treatment
X3dbfcy5plogcy3slide601norm
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
X3dbfcy3plogcy5slide607norm
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X4dbfcy5plogcy3slide480norm
X2.5..vs..50..air.saturation.Replicate.2
Biological.replicate.2.of.6..kanamycin.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
Bedaquiline.vs..DMSO.60min
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X3dbfcy5plogcy3slide603norm
Biological.replicate.3.of.6..kanamycin.treatment
Wild.type.rep3
X4dbfcy5plogcy3slide901norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
WT.vs..DglnR.N_starvation_rep1
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DglnR.N_starvation_rep2
DglnR_without.vs..with.N_dyeswap_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X2XR.rep2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
Biological.replicate.4.of.6..negative.control
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
X4dbfcy3plogcy5slide903norm
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