Module 246 Residual: 0.55
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.55 | 1.2e-23 | 0.000044 | 84 | 18 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 1.2e-23 | |
| Motif 2 |
 |
| e-value: 0.000044 |
| MSMEG_1672 Succinate dehydrogenase, cytochrome b556 subunit | MSMEG_3372 Transcriptional regulator, ArsR family (Transcriptional regulator, ArsR family protein) |
| MSMEG_1673 Cytidine deaminase (EC 3.5.4.5) | MSMEG_5179 DoxX subfamily protein, putative |
| MSMEG_1670 Succinate dehydrogenase flavoprotein subunit (EC 1.3.5.1) | MSMEG_5176 Methyltransferase type 11 |
| MSMEG_1671 Succinate dehydrogenase hydrophobic membrane anchor protein SdhD (EC 1.3.5.1) | MSMEG_3823 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100) |
| MSMEG_1669 Succinate dehydrogenase iron-sulfur protein subunit SdhB (EC 1.3.-.-) (Succinate dehydrogenase, iron-sulfur protein) (EC 1.3.99.1) | MSMEG_5177 Regulatory protein, TetR (Transcriptional regulator, TetR family) |
| MSMEG_1236 Mpr protein (Uncharacterized protein) | MSMEG_3822 Regulatory protein GntR, HTH |
| MSMEG_5178 Integral membrane protein (Transmembrane transport protein mmpL13a) | MSMEG_3825 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100) (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.-) |
| MSMEG_3824 Uncharacterized protein (YahG/YlbE-like protein) | MSMEG_1237 Uncharacterized protein |
| MSMEG_3373 Major facilitator superfamily protein MFS_1 | MSMEG_3826 Uncharacterized protein |
Bedaquiline.vs..DMSO.30min
WT.vs..DglnR.N_starvation_rep2
WT.vs..DamtR.without.N_rep1
Biological.replicate.2.of.7..panaxydol.treatment
WT.vs..DamtR.without.N_rep2
M..smegmatis.Acid.NO.treated
Mycobacterium.smegmatis.Spheroplast.induced
Wild.type.rep2.x
Biological.replicate.3.of.7..falcarinol.treatment
Wild.type.rep3
dosR.WT_Replicate1
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.7.of.7..falcarinol.treatment
Wild.type.rep1.x
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
Biological.replicate.3.of.7..panaxydol.treatment
DglnR_without.vs..with.N_rep2
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
WT.with.vs..without.N_dye.swap_rep1
rel.knockout.rep2
rel.knockout.rep1
Biological.replicate.1.of.7..falcarinol.treatment
DglnR_without.vs..with.N_rep1
Biological.replicate.6.of.7..falcarinol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
Plogcy5plogcy3slide113norm
Biological.replicate.1.of.7..panaxydol.treatment
Biological.replicate.5.of.7..panaxydol.treatment
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
X4dbfcy5plogcy3slide480norm
Biological.replicate.2.of.6..isoniazid.treatment
WT_log.phase_rep2
X2.5..vs..50..air.saturation.Replicate.5
X3dbfcy3plogcy5slide607norm
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
Biological.replicate.5.of.6..isoniazid.treatment
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep2
WT.vs..DglnR.N_starvation_dye.swap_rep1
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.5
Bedaquiline.vs..DMSO.60min
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Biological.replicate.7.of.7..panaxydol.treatment
X3dbfcy5plogcy3slide603norm
Biological.replicate.3.of.6..kanamycin.treatment
X4dbfcy5plogcy3slide901norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DglnR.N_starvation_rep1
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
Biological.replicate.1.of.6..negative.control
Biological.replicate.4.of.7..ethambutol.treatment
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
Biological.replicate.6.of.7..panaxydol.treatment
Biological.replicate.5.of.7..falcarinol.treatment
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