Module 249 Residual: 0.60
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.60 | 0.000000000099 | 0.000083 | 80 | 36 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.000000000099 | |
| Motif 2 |
 |
| e-value: 0.000083 |
| MSMEG_6485 ATP binding protein (Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein) | MSMEG_6926 Poly(A) polymerase PcnA (EC 2.7.7.-) (tRNA adenylyltransferase) (EC 2.7.7.72) |
| MSMEG_2832 Uncharacterized protein | MSMEG_3673 4-alpha-glucanotransferase (EC 2.4.1.25) |
| MSMEG_3339 Uncharacterized protein | MSMEG_5335 Formamidase (EC 3.5.1.49) |
| MSMEG_3056 ABC transporter ATP-binding protein | MSMEG_6928 Uncharacterized protein |
| MSMEG_3057 ABC-type metal ion transport system, permease component (Putative D-methionine ABC transporter, permease protein) | MSMEG_4572 DNA polymerase III, delta subunit |
| MSMEG_3058 Lipoprotein | MSMEG_4417 Peptide methionine sulfoxide reductase MsrA (Protein-methionine-S-oxide reductase) (EC 1.8.4.11) (Peptide-methionine (S)-S-oxide reductase) |
| MSMEG_6927 MutT/nudix family protein | MSMEG_6285 DNA polymerase III gamma/tau subunit (EC 2.7.7.7) (DNA polymerase III subunit gamma/tau) |
| MSMEG_1918 Sensor histidine kinase (Uncharacterized protein) | MSMEG_4418 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) (Peptide-methionine (R)-S-oxide reductase) |
| MSMEG_0433 Integral membrane nitrite extrusion protein NarK1 (Nitrite extrusion protein) | MSMEG_6933 Thioredoxin reductase (EC 1.8.1.9) |
| MSMEG_3461 Catalase-peroxidase 2 (CP 2) (EC 1.11.1.21) (Peroxidase/catalase 2) | MSMEG_2784 Methionine-R-sulfoxide reductase (EC 1.8.4.-) (EC 1.8.4.11) |
| MSMEG_3460 Ferric uptake regulation protein (Ferric uptake regulator, Fur family) (EC 1.11.1.6) | MSMEG_2408 Uncharacterized oxidoreductase MSMEG_2408/MSMEI_2347 (EC 1.-.-.-) |
| MSMEG_6029 Uncharacterized protein | MSMEG_2409 Alpha/beta hydrolase fold family protein |
| MSMEG_3671 Integral membrane protein | MSMEG_3890 Pup--protein ligase (EC 6.3.2.n2) (Proteasome accessory factor A) (Pup-conjugating enzyme) |
| MSMEG_2411 Conserved integral membrane protein | MSMEG_3891 Alpha/beta hydrolase fold protein (EC 3.-.-.-) (Hydrolase) |
| MSMEG_2410 Putative conserved membrane protein (Putative serine-threonine protein kinase) | MSMEG_3181 Uncharacterized protein |
| MSMEG_0115 Haloacid dehalogenase, type II (L-2-haloacid dehalogenase) (EC 3.8.1.2) | MSMEG_2407 Uncharacterized oxidoreductase MSMEG_2407/MSMEI_2346 (EC 1.-.-.-) |
| MSMEG_6929 Integral membrane protein MviN (Integral membrane protein MviN, putative) | MSMEG_2701 Uncharacterized protein |
| MSMEG_6941 R3H domain-containing protein (Single-stranded nucleic acid binding R3H) | MSMEG_2445 UPF0061 protein MSMEG_2445/MSMEI_2384 |
KO_stationary.phase_rep1
Bedaquiline.vs..DMSO.30min
Biological.replicate.5.of.7..falcarinol.treatment
KO_log.phase_rep1
Sub.MIC.INH
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.4.of.6..negative.control
Plogcy5plogcy3slide110norm
Biological.replicate.5.of.6..isoniazid.treatment
Biological.replicate.1.of.6..negative.control
Plogcy5plogcy3slide113norm
Tet.CarD.vs.Control..Replicates.1..2..and.3.
dosR.WT_Replicate1
Biological.replicate.5.of.6..negative.control
KO_log.phase_rep2
Wild.type.rep2.y
Biological.replicate.7.of.7..falcarinol.treatment
Biological.replicate.2.of.7..panaxydol.treatment
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
MB100pruR.vs..MB100.rep.2
DglnR_without.vs..with.N_rep2
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.6..kanamycin.treatment
Bedaquiline.vs..DMSO..45min
Biological.replicate.4.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
dosR.WT_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Biological.replicate.3.of.6..isoniazid.treatment
WT.vs..DamtR.without.N_.dyeswap_rep1
Biological.replicate.5.of.6..kanamycin.treatment
X3dbfcy5plogcy3slide601norm
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
mc2155.vs.Dcrp1.replicate.2
stphcy5plogcy3slide487norm
Slow.vs..Fast.Replicate.3
Biological.replicate.1.of.7..panaxydol.treatment
Biological.replicate.3.of.6..negative.control
dcpA.knockout.rep2
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
WT_log.phase_rep1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
X2.5..vs..50..air.saturation.Replicate.3
Biological.replicate.2.of.6..negative.control
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
Biological.replicate.2.of.6..kanamycin.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
Slow.vs..Fast.Replicate.2
Biological.replicate.7.of.7..panaxydol.treatment
dosR.WT_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
mc2155.vs.Dcrp1.replicate.1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.vs..DamtR.N.surplus_dyeswap_rep2
X2XR.rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Biological.replicate.4.of.6..kanamycin.treatment
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