Module 251 Residual: 0.49
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.49 | 0.0000000000000088 | 0.004 | 78 | 31 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000000000000088 | |
| Motif 2 |
 |
| e-value: 0.004 |
| MSMEG_2268 Rieske (2Fe-2S) region (Uncharacterized protein) | MSMEG_4285 Octanoyltransferase (EC 2.3.1.181) (Lipoate-protein ligase B) (Lipoyl/octanoyl transferase) (Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase) |
| MSMEG_4033 TetR-family protein transcriptional regulator (Transcriptional regulator, TetR family) | MSMEG_4286 Lipoyl synthase (EC 2.8.1.8) (Lip-syn) (LS) (Lipoate synthase) (Lipoic acid synthase) (Sulfur insertion protein LipA) |
| MSMEG_4032 Zinc-binding alcohol dehydrogenase | MSMEG_4287 Conserved transmembrane protein (Integral membrane protein) |
| MSMEG_6396 Antigen 85-C (EC 2.3.1.-) (Secreted MPT51/MPB51 antigen protein fbpD) | MSMEG_6571 Uncharacterized protein |
| MSMEG_6397 Uncharacterized protein | MSMEG_1528 Cutinase (EC 3.1.1.74) |
| MSMEG_5229 Uncharacterized protein | MSMEG_1529 Cutinase (EC 3.1.1.74) |
| MSMEG_6424 Probable conserved transmembrane protein (Uncharacterized protein) | MSMEG_1508 Amino acid permease-associated region |
| MSMEG_0099 Uncharacterized protein | MSMEG_5684 Phosphoserine aminotransferase (EC 2.6.1.52) (Phosphohydroxythreonine aminotransferase) |
| MSMEG_2479 Uncharacterized protein | MSMEG_1113 GDP-mannose-dependent alpha-mannosyltransferase (EC 2.4.1.-) (Guanosine diphosphomannose-dependent alpha-mannosyltransferase) |
| MSMEG_6908 GntR family transcriptional regulator (Putative HTH-type transcriptional regulator) | MSMEG_1506 TetR-family transcriptional regulator (Transcriptional regulator, TetR family protein) |
| MSMEG_4473 Integral membrane protein (Membrane protein) | MSMEG_1675 Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) (Thymidine phosphorylase) (EC 2.4.2.4) |
| MSMEG_5766 Uncharacterized protein | MSMEG_2156 NmrA-like protein (Uncharacterized protein) |
| MSMEG_1487 Putative transmembrane anti-sigma factor (Uncharacterized protein) | MSMEG_3744 Tyrosine recombinase XerD |
| MSMEG_1486 RNA polymerase sigma-70 factor | MSMEG_3745 MutT/nudix family protein (NTP pyrophosphohydrolase including oxidative damage repair enzymes) (EC 3.6.1.13) |
| MSMEG_6906 Alpha/beta hydrolase fold protein (Putative hydrolase) | MSMEG_3746 CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase) |
| MSMEG_4284 NAD dependent epimerase/dehydratase (Uncharacterized protein) |
mc2155.vs.Dcrp1.replicate.1
WT.vs..DamtR.without.N_rep1
Biological.replicate.3.of.6..kanamycin.treatment
dcpA.knockout.rep2
DamtR.with.vs..DamtR.without.N_.rep1
Plogcy5plogcy3slide110norm
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.4.of.6..isoniazid.treatment
dosR.WT_Replicate2
dosR.WT_Replicate1
Wild.type.rep2.y
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Wild.type.rep1.x
DglnR_without.vs..with.N_rep1
DglnR_without.vs..with.N_rep2
WT.vs..DamtR.without.N_.dyeswap_rep1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Biological.replicate.1.of.7..ethambutol.treatment
rel.knockout.rep2
Wild.type.rep3
WT_log.phase_rep2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
DamtR.with.vs..DamtR.without.N_.rep2
X3dbfcy5plogcy3slide601norm
X0.6..vs..50..air.saturation.Replicate.3
Sub.MIC.INH
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.2.of.7..falcarinol.treatment
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
dosR.WT_Replicate4
stphcy5plogcy3slide487norm
Slow.vs..Fast.Replicate.3
Biological.replicate.1.of.7..panaxydol.treatment
WT.vs..DamtR.N.surplus_rep2
Biological.replicate.5.of.7..panaxydol.treatment
Biological.replicate.2.of.6..isoniazid.treatment
X4dbfcy5plogcy3slide480norm
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
X4XR.rep2
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.5.of.7..ethambutol.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Slow.vs..Fast.Replicate.5
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.1
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
Biological.replicate.5.of.6..negative.control
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.vs..DamtR.N.surplus_dyeswap_rep2
Wild.type.rep2.x
X2XR.rep1
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
Wild.type.rep1.y
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
Plogcy5plogcy3slide113norm
M..smegmatis.Acid.NO.treated
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
X4dbfcy3plogcy5slide903norm
Comments
Log in to post comments