Module 258 Residual: 0.54
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.54 | 0.0000018 | 0.00072 | 85 | 19 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000018 | |
| Motif 2 |
 |
| e-value: 0.00072 |
| MSMEG_4352 Putative secreted protein | MSMEG_2969 NADH:flavin oxidoreductase/NADH oxidase (NADH:flavin oxidoreductase/nadh oxidase) |
| MSMEG_4353 Uncharacterized protein | MSMEG_0871 Molybdopterin dehydrogenase FAD-binding protein (EC 1.-.-.-) (Putative aldehyde or xanthine dehydrogenase, molybdopterin binding subunit protein) |
| MSMEG_4356 Binding-protein-dependent transport systems inner membrane component (Inner membrane ABC transporter permease protein YddQ) | MSMEG_3012 Acetyl-CoA acetyltransferase (EC 2.3.1.16) (Acetyl-CoA acetyltransferases) |
| MSMEG_4357 ABC transporter related protein (ABC transporter, ATP-binding protein) | MSMEG_3013 Putative transcriptional regulator family protein |
| MSMEG_4354 Dipeptide-binding protein of ABC transport system | MSMEG_2970 Polysaccharide deacetylase (EC 3.5.1.41) |
| MSMEG_4355 Peptide ABC transporter, permease protein | MSMEG_3710 Cytochrome B561 (Cytochrome b561 family protein) |
| MSMEG_4358 D-beta-hydroxybutyrate dehydrogenase (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.100) | MSMEG_1085 Dipeptide transport system permease protein DppB (Putative didpeptide ABC transporter permease protein) |
| MSMEG_0870 Aldehyde oxidase and xanthine dehydrogenase, a/b (EC 1.17.1.4) (Oxidoreductase) | MSMEG_1084 ABC transporter, solute-binding protein (EC 3.1.3.26) (Peptide/opine/nickel uptake family protein ABC transporter, periplasmic substrate-binding protein, putative) |
| MSMEG_3708 Catalase-related peroxidase (EC 1.11.1.-) | MSMEG_1086 ABC transporter permease protein (ABC-type oligopeptide transport systems, permease component) |
| MSMEG_0872 Twin-arginine translocation pathway signal |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
Biological.replicate.2.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.15min
Biological.replicate.4.of.6..negative.control
Biological.replicate.2.of.6..isoniazid.treatment
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.4.of.6..isoniazid.treatment
MB100pruR.vs..MB100..rep.3
stphcy5plogcy3slide487norm
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Plogcy5plogcy3slide110norm
Wild.type.rep1.x
Biological.replicate.7.of.7..falcarinol.treatment
DglnR_without.vs..with.N_rep2
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.5.of.7..panaxydol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
rel.knockout.rep1
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
X0.6..vs..50..air.saturation.Replicate.4
WT.vs..DamtR.N.surplus_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
WT.vs..DamtR.N.surplus_rep2
dcpA.knockout.rep2
dcpA.knockout.rep1
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
X3dbfcy3plogcy5slide607norm
WT_log.phase_rep1
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
Biological.replicate.2.of.6..kanamycin.treatment
WT_stationary.phase_rep1
X4XR.rep2
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
Biological.replicate.5.of.7..ethambutol.treatment
Biological.replicate.5.of.6..isoniazid.treatment
Bedaquiline.vs..DMSO.60min
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Biological.replicate.6.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
Biological.replicate.3.of.6..kanamycin.treatment
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.vs..DglnR.N_starvation_rep1
WT.vs..DglnR.N_starvation_rep2
DglnR_without.vs..with.N_dyeswap_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Sub.MIC.INH
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.3.of.6..negative.control
Biological.replicate.2.of.7..ethambutol.treatment
Bedaquiline.vs..DMSO.120min
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