Module 262 Residual: 0.53
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.53 | 3.3e-24 | 43 | 83 | 17 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 3.3e-24 | |
| Motif 2 |
 |
| e-value: 43 |
| MSMEG_2243 Isochorismatase family protein | MSMEG_2241 AMP-dependent synthetase and ligase (Medium chain acyl-CoA synthetase) |
| MSMEG_2077 Acyl-CoA dehydrogenase, C-domain protein | MSMEG_1218 ABC-type transport system ATP-binding protein II (Branched-chain amino acid ABC transporter ATP-binding protein) |
| MSMEG_5639 Enoyl-CoA hydratase (Enoyl-CoA hydratase/isomerase) (EC 4.2.1.17) | MSMEG_1219 ABC-type transport system permease protein II (Inner-membrane translocator) |
| MSMEG_5638 Metallo-beta-lactamase family protein (Zn-dependent hydrolase of the beta-lactamase fold-like protein) | MSMEG_1221 Rifampin ADP-ribosyl transferase |
| MSMEG_0693 Uncharacterized protein | MSMEG_1220 ABC-type transport system permease protein I (Branched-chain amino acid ABC-type transport system) |
| MSMEG_0692 Conserved hypothetical proline and threonine rich protein (Uncharacterized protein) | MSMEG_4695 Protozoan/cyanobacterial globin family protein |
| MSMEG_0691 LuxR family transcriptional regulator (Putative transcriptional regulatory protein) | MSMEG_1217 ABC-type transport system ATP-binding protein I (Branched-chain amino acid ABC transporter ATP-binding protein) |
| MSMEG_4694 HNH endonuclease family protein | MSMEG_0197 NUDIX hydrolase (Nudix hydrolase) |
| MSMEG_0604 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein (EC 1.1.1.95) (Glyoxylate reductase) (EC 1.1.1.26) |
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
Biological.replicate.4.of.6..negative.control
WT.vs..DamtR.without.N_rep2
M..smegmatis.Acid.NO.treated
Mycobacterium.smegmatis.Spheroplast.induced
Wild.type.rep2.x
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.4.of.6..isoniazid.treatment
dosR.WT_Replicate3
dosR.WT_Replicate2
Biological.replicate.5.of.6..negative.control
KO_log.phase_rep2
Biological.replicate.2.of.7..panaxydol.treatment
Plogcy5plogcy3slide110norm
Wild.type.rep1.x
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
Biological.replicate.6.of.6..negative.control
DglnR_without.vs..with.N_rep2
MB100pruR.vs..MB100.rep.1
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.5.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.60min
Biological.replicate.3.of.7..falcarinol.treatment
X4XR.rep1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Bedaquiline.vs..DMSO.15min
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
WT.vs..DamtR.without.N_.dyeswap_rep1
Biological.replicate.5.of.6..kanamycin.treatment
X3dbfcy5plogcy3slide601norm
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
WT.vs..DglnR.N_starvation_dye.swap_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
stphcy5plogcy3slide487norm
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
dcpA.knockout.rep2
dcpA.knockout.rep1
Biological.replicate.2.of.6..isoniazid.treatment
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
WT_log.phase_rep1
DglnR_without.vs..with.N_rep1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep1
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.5.of.7..ethambutol.treatment
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.1
Biological.replicate.6.of.7..ethambutol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X3dbfcy5plogcy3slide603norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
WT.vs..DamtR.N.surplus_dyeswap_rep2
DglnR_without.vs..with.N_dyeswap_rep2
Biological.replicate.1.of.6..negative.control
DglnR_without.vs..with.N_dyeswap_rep1
WT.vs..DglnR.N_starvation_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Biological.replicate.6.of.6..isoniazid.treatment
Plogcy5plogcy3slide113norm
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
X4dbfcy3plogcy5slide903norm
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