Module 271 Residual: 0.55
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.55 | 0.0000000000000084 | 56 | 78 | 30 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000000000000084 | |
| Motif 2 |
 |
| e-value: 56 |
| MSMEG_5777 Transcription regulator | MSMEG_3777 Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) |
| MSMEG_5778 Alcohol dehydrogenase, zinc-binding (Alcohol dehydrogenase, zinc-binding protein) (EC 1.6.5.5) | MSMEG_6592 Short-chain dehydrogenase/reductase SDR |
| MSMEG_5188 Abortive infection protein (Caax amino protease family protein) | MSMEG_4476 Uncharacterized protein |
| MSMEG_5189 NAD-dependent epimerase/dehydratase (EC 4.2.1.46) (Oxidoreductase) | MSMEG_4475 LppP protein |
| MSMEG_3034 Cytoplasmic peptidase PepQ (EC 3.4.13.9) (Metallopeptidase, M24 family protein) | MSMEG_3436 Uncharacterized protein |
| MSMEG_2577 Uncharacterized protein | MSMEG_2545 Probable dual-specificity RNA methyltransferase RlmN (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase) (Ribosomal RNA large subunit methyltransferase N) (tRNA (adenine(37)-C(2))-methyltransferase) (tRNA m2A37 methyltransferase) |
| MSMEG_2551 Uncharacterized protein | MSMEG_0527 2-hydroxycyclohexnecarboxyl-CoA dehydrogenase (Short-chain dehydrogenase/reductase SDR) |
| MSMEG_1383 Endonuclease IV (EC 3.1.21.2) | MSMEG_2626 Uncharacterized protein |
| MSMEG_1664 Uncharacterized protein | MSMEG_4820 Uncharacterized protein |
| MSMEG_0605 Uncharacterized protein | MSMEG_1694 Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase) |
| MSMEG_0235 Probable conserved membrane protein | MSMEG_1331 Enoyl-CoA hydratase (Enoyl-CoA hydratase EchA3) (EC 4.2.1.17) |
| MSMEG_0236 Putative conserved transmembrane protein | MSMEG_1686 NLP/P60-family secreted protein (EC 3.2.1.14) (NPL/P60-family protein secreted protein) |
| MSMEG_3778 Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) | MSMEG_4275 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (NN:DBI PRT) (EC 2.4.2.21) (N(1)-alpha-phosphoribosyltransferase) |
| MSMEG_2653 Riboflavin biosynthesis protein (EC 2.7.1.26) (EC 2.7.7.2) | MSMEG_4274 Cobinamide kinase / cobinamide phosphate guanyltransferase (EC 2.7.1.156) (EC 2.7.7.62) |
| MSMEG_2652 Iron (Metal) dependent repressor, DtxR family (Iron repressor protein) | MSMEG_4277 Adenosylcobinamide-GDP ribazoletransferase (EC 2.7.8.26) (Cobalamin synthase) (Cobalamin-5'-phosphate synthase) |
Biological.replicate.5.of.7..falcarinol.treatment
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.3.of.6..kanamycin.treatment
WT.vs..DamtR.without.N_rep2
Mycobacterium.smegmatis.Spheroplast.induced
Biological.replicate.2.of.6..isoniazid.treatment
Wild.type.rep3
Biological.replicate.1.of.7..panaxydol.treatment
dosR.WT_Replicate1
KO_log.phase_rep2
Wild.type.rep2.y
dosR.WT_Replicate4
Biological.replicate.6.of.6..negative.control
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Bedaquiline.vs..DMSO.60min
rel.knockout.rep2
rel.knockout.rep1
Biological.replicate.6.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.15min
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
X0.6..vs..50..air.saturation.Replicate.1
X3dbfcy5plogcy3slide601norm
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
WT.vs..DglnR.N_starvation_dye.swap_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
stphcy5plogcy3slide487norm
Biological.replicate.7.of.7..panaxydol.treatment
X3dbfcy3plogcy5slide607norm
mc2155.vs.Dcrp1.replicate.4
WT.vs..DamtR.N.surplus_rep2
dcpA.knockout.rep2
dcpA.knockout.rep1
WT.vs..DamtR.N.surplus_rep1
Plogcy5plogcy3slide111norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.6.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
X4XR.rep1
Slow.vs..Fast.Replicate.4
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
mc2155.vs.Dcrp1.replicate.1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.vs..DamtR.N.surplus_dyeswap_rep2
Biological.replicate.1.of.6..negative.control
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
Plogcy5plogcy3slide113norm
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Biological.replicate.3.of.6..negative.control
X4dbfcy3plogcy5slide903norm
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