Module 274 Residual: 0.49
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.49 | 9.9e-16 | 0.000000000044 | 78 | 26 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 9.9e-16 | |
| Motif 2 |
 |
| e-value: 0.000000000044 |
| MSMEG_3641 Uncharacterized protein (von Willebrand factor, type A) | MSMEG_2796 Integral membrane protein |
| MSMEG_5480 Uncharacterized protein | MSMEG_0809 Isoprenylcysteine carboxyl methyltransferase |
| MSMEG_5482 Large-conductance mechanosensitive channel | MSMEG_6236 Response regulator, two-component system (Two-component system, regulatory protein) |
| MSMEG_4796 Uncharacterized protein | MSMEG_6238 Putative two-component system sensor kinase |
| MSMEG_4797 Uncharacterized protein | MSMEG_4200 Peptidase M20 |
| MSMEG_5124 2,4-dienoyl-coA reductase (Putative 2,4-dienoyl-CoA reductase NADPH) (EC 1.3.1.34) | MSMEG_0811 Monooxygenase, FAD-binding protein (Oxidoreductase) |
| MSMEG_4795 ABC-transporter integral membrane protein | MSMEG_2529 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein (EC 1.1.1.26) (Glyoxylate reductase) |
| MSMEG_5321 Uncharacterized protein | MSMEG_2528 Glycerate kinase (EC 2.7.1.31) |
| MSMEG_5247 PhoH family protein (PhoH-like protein phoH2 (Phosphate starvation-inducible protein psiH)) | MSMEG_5319 Alkyl hydroperoxide reductase AhpD (EC 1.11.1.15) |
| MSMEG_6659 Uncharacterized protein | MSMEG_0638 Conserved hypothetical proline and threonine rich protein |
| MSMEG_5955 Protein-tyrosine kinase, putative (Uncharacterized protein) | MSMEG_2746 Conserved hypothetical alanine and leucine rich protein |
| MSMEG_5954 Cell surface polysaccharide biosynthesis, putative | MSMEG_5341 Alpha/beta superfamily hydrolase (Dipeptidyl aminopeptidase/acylaminoacyl peptidase) |
| MSMEG_5340 TetR-family protein transcriptional regulator (TetR-family transcriptional regulator) | MSMEG_6583 Antigen 85-C (EC 2.3.1.-) (Putative esterase) |
Wild.type.rep1.y
Bedaquiline.vs..DMSO.30min
WT.vs..DamtR.without.N_rep1
Biological.replicate.2.of.7..panaxydol.treatment
WT.vs..DamtR.without.N_rep2
Mycobacterium.smegmatis.Spheroplast.induced
Wild.type.rep2.x
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.4.of.6..isoniazid.treatment
dosR.WT_Replicate2
KO_log.phase_rep2
Wild.type.rep2.y
Plogcy5plogcy3slide110norm
Wild.type.rep1.x
Biological.replicate.7.of.7..falcarinol.treatment
MB100pruR.vs..MB100.rep.2
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
rel.knockout.rep2
Bedaquiline.vs..DMSO..45min
Biological.replicate.5.of.6..isoniazid.treatment
Biological.replicate.6.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.15min
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
WT.vs..DamtR.N.surplus_rep2
Biological.replicate.5.of.7..panaxydol.treatment
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DamtR.N.surplus_rep1
Plogcy5plogcy3slide111norm
WT_log.phase_rep2
X2.5..vs..50..air.saturation.Replicate.5
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
X4XR.rep1
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Slow.vs..Fast.Replicate.5
Bedaquiline.vs..DMSO.60min
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
X4dbfcy5plogcy3slide901norm
Biological.replicate.5.of.7..falcarinol.treatment
DglnR_without.vs..with.N_dyeswap_rep2
Biological.replicate.1.of.6..negative.control
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
Biological.replicate.2.of.6..negative.control
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
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