Module 281 Residual: 0.58
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.58 | 0.00001 | 5.3 | 88 | 16 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.00001 | |
| Motif 2 |
 |
| e-value: 5.3 |
| MSMEG_5492 Acetyl-/propionyl-CoA carboxylase beta subunit accD2 (EC 6.4.1.3) (Acetyl-CoA carboxylase carboxyltransferase) | MSMEG_5197 Acyl-CoA dehydrogenase (Long-chain specific acyl-CoA dehydrogenase) (EC 1.3.8.8) |
| MSMEG_5493 Acetyl-/propionyl-coenzyme A carboxylase alpha chain (EC 6.3.4.14) (Acetyl-/propionyl-coenzyme A carboxylase alpha chain, AccA2) | MSMEG_6416 Phosphoglycerate mutase (EC 5.4.2.-) (Phosphoglycerate mutase family protein) |
| MSMEG_5490 Uncharacterized protein | MSMEG_6420 Abortive infection protein |
| MSMEG_6418 Prephenate dehydratase (PDT) (EC 4.2.1.51) | MSMEG_0121 Rhamnolipids biosynthesis 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100) (Short-chain dehydrogenase/reductase SDR) |
| MSMEG_5494 Acyl-CoA dehydrogenase fadE12 (EC 1.3.99.-) (Acyl-CoA dehydrogenase-like protein) (EC 1.3.8.-) | MSMEG_0120 Probable transcriptional regulatory protein (Transcriptional regulatory protein (Possibly TetR-family)) |
| MSMEG_5495 Enoyl-CoA hydratase (Enoyl-CoA hydratase EchA7) (EC 4.2.1.17) | MSMEG_5199 Acetyl-CoA acetyltransferase (EC 2.3.1.16) (Putative acyl-CoA dehydrogenase) |
| MSMEG_6421 Transcriptional regulator | MSMEG_5198 Carnitinyl-CoA dehydratase (EC 4.2.1.-) |
| MSMEG_5491 Acyl-CoA dehydrogenase FadE13 (EC 1.3.8.-) (Putative acyl-CoA dehydrogenase) | MSMEG_6419 Uncharacterized protein |
KO_stationary.phase_rep2
Biological.replicate.4.of.7..ethambutol.treatment
Wild.type.rep2.x
MB100pruR.vs..MB100.rep.4
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.7..falcarinol.treatment
stphcy5plogcy3slide487norm
Biological.replicate.2.of.7..ethambutol.treatment
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.4.of.7..falcarinol.treatment
Biological.replicate.6.of.7..ethambutol.treatment
Bedaquiline.vs..DMSO.120min
WT.vs..DamtR.without.N_rep2
Biological.replicate.4.of.6..negative.control
dosR.WT_Replicate3
dosR.WT_Replicate2
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
Biological.replicate.3.of.6..negative.control
WT_log.phase_rep2
stphcy3plogcy5slide581norm
WT_log.phase_rep1
WT.with.vs..without.N_dye.swap_rep1
WT.with.vs..without.N_dye.swap_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.5.of.7..ethambutol.treatment
Bedaquiline.vs..DMSO.60min
WT.vs..DglnR.N_starvation_dye.swap_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.7.of.7..panaxydol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
WT.vs..DglnR.N_starvation_rep2
rel.knockout.rep2
Bedaquiline.vs..DMSO.15min
Biological.replicate.4.of.6..kanamycin.treatment
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Slow.vs..Fast.Replicate.5
DglnR_without.vs..with.N_rep1
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.6..kanamycin.treatment
Biological.replicate.3.of.6..isoniazid.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
Biological.replicate.5.of.6..kanamycin.treatment
Biological.replicate.2.of.6..isoniazid.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
Biological.replicate.2.of.6..negative.control
Bedaquiline.vs..DMSO.30min
Biological.replicate.5.of.7..falcarinol.treatment
KO_log.phase_rep2
KO_log.phase_rep1
Wild.type.rep1.x
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.3.of.7..falcarinol.treatment
Wild.type.rep3
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
mc2155.vs.Dcrp1.replicate.2
mc2155.vs.Dcrp1.replicate.3
X3dbfcy3plogcy5slide607norm
mc2155.vs.Dcrp1.replicate.4
Plogcy5plogcy3slide111norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
X4XR.rep2
X4XR.rep1
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
X3dbfcy5plogcy3slide603norm
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate1
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