Module 287 Residual: 0.56
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.56 | 6.1e-17 | 0.000000000018 | 77 | 30 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 6.1e-17 | |
| Motif 2 |
 |
| e-value: 0.000000000018 |
| MSMEG_2394 Cys/Met metabolism pyridoxal-phosphate-dependent enzyme (EC 4.4.1.1) (Putative cystathionine gamma-synthase) (EC 2.5.1.48) | MSMEG_4302 Adenylate cyclase, putative (CHAD domain containing protein) |
| MSMEG_5205 Uncharacterized protein | MSMEG_3404 HNH endonuclease domain protein (Uncharacterized protein) |
| MSMEG_6524 ABC Polyamine/Opine/Phosphonate transporter, periplasmic ligand binding protein (Putative solute binding protein of ABC transporter system) | MSMEG_6514 Maltokinase (MaK) (EC 2.7.1.175) (Maltose-1-phosphate synthase) |
| MSMEG_6523 ABC transporter, membrane spanning protein | MSMEG_6515 Trehalose synthase/amylase TreS (EC 3.2.1.1) (EC 5.4.99.16) (Maltose alpha-D-glucosyltransferase) (MTase) |
| MSMEG_6522 ABC transporter, inner membrane subunit (Binding-protein-dependent transport systems inner membrane component) | MSMEG_0730 Oleandomycin glycosyltransferase (EC 2.4.1.-) |
| MSMEG_6521 Sulfate/thiosulfate import ATP-binding protein CysA 2 (EC 3.6.3.25) | MSMEG_2544 Transcriptional regulator, LysR family (Transcriptional regulator, LysR family protein) |
| MSMEG_1604 Cholesterol oxidase ChoD (EC 1.1.3.6) (FAD dependent oxidoreductase) | MSMEG_4695 Protozoan/cyanobacterial globin family protein |
| MSMEG_2251 Nitrate/nitrite response regulator protein (Response regulator receiver) (EC 2.7.13.3) | MSMEG_4694 HNH endonuclease family protein |
| MSMEG_5938 Uncharacterized protein | MSMEG_6518 Uncharacterized protein MSMEG_6518/MSMEI_6344 |
| MSMEG_2392 2-phospho-L-lactate guanylyltransferase (LP guanylyltransferase) (EC 2.7.7.68) | MSMEG_2542 Integral membrane protein DUF6 |
| MSMEG_2393 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) | MSMEG_0463 MmpL4 protein (Transmembrane transport protein MmpL1) |
| MSMEG_5935 ATP-dependent DNA helicase (ATP-dependent DNA helicase RecQ) | MSMEG_2248 Two-component system sensor kinase |
| MSMEG_1080 Large subunit of N,N-dimethylformamidase | MSMEG_4300 Transcription regulator AmtR (Transcriptional regulator, TetR family) |
| MSMEG_4301 Acyl-CoA synthase | MSMEG_2643 Uncharacterized protein |
| MSMEG_6525 Uncharacterized protein | MSMEG_4094 Acyl-CoA dehydrogenase (Putative Acyl-CoA dehydrogenase) (EC 1.3.8.4) |
Bedaquiline.vs..DMSO.30min
WT.vs..DglnR.N_starvation_rep2
KO_log.phase_rep1
WT.vs..DamtR.without.N_rep2
DamtR.with.vs..DamtR.without.N_.rep1
dosR.WT_Replicate4
Biological.replicate.5.of.6..isoniazid.treatment
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate1
KO_log.phase_rep2
Wild.type.rep2.y
Plogcy5plogcy3slide110norm
Wild.type.rep1.x
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
Biological.replicate.3.of.7..panaxydol.treatment
MB100pruR.vs..MB100.rep.2
DglnR_without.vs..with.N_rep2
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
X4XR.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..panaxydol.treatment
Biological.replicate.7.of.7..falcarinol.treatment
DglnR_without.vs..with.N_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.3
Slow.vs..Fast.Replicate.3
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
Biological.replicate.3.of.6..negative.control
X3dbfcy5plogcy3slide603norm
dcpA.knockout.rep1
Sub.MIC.INH
WT.vs..DamtR.N.surplus_rep1
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
Biological.replicate.4.of.7..panaxydol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
WT_stationary.phase_rep2
X4XR.rep2
Biological.replicate.5.of.7..ethambutol.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Slow.vs..Fast.Replicate.5
Biological.replicate.4.of.7..falcarinol.treatment
WT.vs..DamtR.N.surplus_dyeswap_rep2
Slow.vs..Fast.Replicate.2
Biological.replicate.7.of.7..panaxydol.treatment
dosR.WT_Replicate3
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
Biological.replicate.1.of.6..negative.control
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
WT.vs..DglnR.N_starvation_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
Plogcy5plogcy3slide113norm
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
M..smegmatis.Acid.NO.treated
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
X4dbfcy3plogcy5slide903norm
Biological.replicate.6.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.120min
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