Module 299 Residual: 0.51
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.51 | 0.0000000000004 | 0.0000000035 | 79 | 31 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000000000004 | |
| Motif 2 |
 |
| e-value: 0.0000000035 |
| MSMEG_5514 Uncharacterized protein | MSMEG_6706 Uncharacterized protein |
| MSMEG_3159 Methylmalonyl-CoA mutase large subunit (Methylmalonyl-CoA mutase large subunit mutB) (EC 5.4.99.2) | MSMEG_6875 Endoribonuclease L-PSP (EC 3.5.99.5) (Endoribonuclease L-PSP family protein) |
| MSMEG_3158 Methylmalonyl-CoA mutase, beta subunit (EC 5.4.99.2) (Methylmalonyl-CoA mutase, small subunit) | MSMEG_4532 Sulfate ABC transporter, permease protein CysT (Sulfate-transport integral membrane protein ABC transporter CysT) |
| MSMEG_3157 Integral membrane protein (Uncharacterized protein) | MSMEG_4533 Sulfate-binding lipoprotein SubI (Sulfate-binding protein) |
| MSMEG_6553 ABC transporter ATP-binding protein (Transmembrane ATP-binding protein ABC transporter) | MSMEG_4530 Sulfate/thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) (Sulfate-transporting ATPase) |
| MSMEG_0321 Transcriptional regulator (Uncharacterized protein) | MSMEG_4531 Sulfate ABC transporter, permease protein CysW (Sulfate-transport integral membrane protein ABC transporter CysW) |
| MSMEG_5858 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100) (Short-chain dehydrogenase/reductase SDR) | MSMEG_0429 Putative ferric uptake regulator |
| MSMEG_5859 Aldehyde dehydrogenase (NAD) family protein (EC 1.2.1.-) (Putative aldehyde dehydrogenase AldA) | MSMEG_6345 Uncharacterized protein |
| MSMEG_6343 Phosphoesterase (EC 3.1.4.-) | MSMEG_6556 Putative transcriptional regulator |
| MSMEG_5856 4-carboxymuconolactone decarboxylase domain protein (EC 4.1.1.44) | MSMEG_6554 Hypothetical ABC transporter ATP-binding protein (Transmembrane ATP-binding protein ABC transporter) |
| MSMEG_5857 6-phosphogluconate dehydrogenase, NAD-binding protein (EC 1.1.1.60) (Putative oxidoreductase) (EC 1.1.-.-) | MSMEG_6555 TetR-family transcriptional regulator (Transcriptional regulator, TetR family protein, putative) |
| MSMEG_5855 Uncharacterized protein | MSMEG_5861 Cytochrome P450 109 (EC 1.14.-.-) (Cytochrome P450 CYP123) |
| MSMEG_1202 Uncharacterized protein | MSMEG_5860 Transcriptional regulator, TetR family (Transcriptional regulator, TetR family protein) |
| MSMEG_1201 Uncharacterized protein | MSMEG_6558 Enoyl-CoA hydratase/isomerase (EC 4.2.1.17) (Putative enoyl-CoA hydratase) |
| MSMEG_4085 Nitrilotriacetate monooxygenase component A (EC 1.14.13.-) (Putative monooxygenase yxeK) | MSMEG_1313 Secreted protein |
| MSMEG_3160 LAO/AO transport system ATPase (EC 2.7.-.-) |
Bedaquiline.vs..DMSO.30min
WT.vs..DglnR.N_starvation_rep2
WT.vs..DamtR.without.N_rep1
KO_log.phase_rep1
M..smegmatis.Acid.NO.treated
Mycobacterium.smegmatis.Spheroplast.induced
Wild.type.rep2.x
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate2
KO_log.phase_rep2
Wild.type.rep2.y
DglnR_without.vs..with.N_rep1
Wild.type.rep1.x
Biological.replicate.7.of.7..falcarinol.treatment
MB100pruR.vs..MB100.rep.4
DamtR.with.vs..DamtR.without.N_.rep2
MB100pruR.vs..MB100.rep.2
DglnR_without.vs..with.N_rep2
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.7.of.7..ethambutol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Bedaquiline.vs..DMSO.60min
rel.knockout.rep2
Biological.replicate.5.of.6..isoniazid.treatment
Biological.replicate.6.of.7..falcarinol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.3.of.6..isoniazid.treatment
WT.vs..DamtR.without.N_.dyeswap_rep1
X0.6..vs..50..air.saturation.Replicate.1
Biological.replicate.2.of.6..kanamycin.treatment
Biological.replicate.4.of.6..kanamycin.treatment
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
WT.vs..DamtR.N.surplus_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
stphcy5plogcy3slide487norm
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.3.of.6..negative.control
Biological.replicate.5.of.7..panaxydol.treatment
Biological.replicate.2.of.6..isoniazid.treatment
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.5
X3dbfcy3plogcy5slide607norm
WT.with.vs..without.N_dye.swap_rep1
X4dbfcy5plogcy3slide480norm
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep2
WT.vs..DglnR.N_starvation_dye.swap_rep1
X4XR.rep2
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
Biological.replicate.5.of.6..negative.control
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
Biological.replicate.5.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
X4dbfcy5plogcy3slide901norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.vs..DglnR.N_starvation_rep1
WT.with.vs..without.N_rep1
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.1.of.6..negative.control
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Sub.MIC.INH
BatchCulture_LBTbroth_StationaryPhase_Replicate3
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.6.of.7..panaxydol.treatment
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