Module 301 Residual: 0.48
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.48 | 9.8e-19 | 0.0098 | 71 | 32 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 9.8e-19 | |
| Motif 2 |
 |
| e-value: 0.0098 |
| MSMEG_5558 Uncharacterized protein | MSMEG_5563 AraC-family protein transcriptional regulator (AraC-family transcriptional regulator) |
| MSMEG_5557 Uncharacterized protein | MSMEG_5564 NAD(P)H dehydrogenase, quinone family protein |
| MSMEG_0091 Putative transcriptional regulator | MSMEG_5355 Uncharacterized protein |
| MSMEG_5974 Uncharacterized protein | MSMEG_5967 Glucose-methanol-choline oxidoreductase |
| MSMEG_0092 Probable transcriptional regulatory protein (TetR-family transcriptional regulator) | MSMEG_2363 Amino acid-binding ACT |
| MSMEG_5971 Uncharacterized protein | MSMEG_2159 Uncharacterized protein |
| MSMEG_4858 Transcriptional regulator, TetR family protein | MSMEG_2365 Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) (EC 6.3.5.7) |
| MSMEG_5507 Uncharacterized protein | MSMEG_2364 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (Asp/Glu-ADT subunit C) (EC 6.3.5.-) |
| MSMEG_6310 4-hydroxybutyrate coenzyme A transferase (EC 2.8.3.-) | MSMEG_0587 L-rhamnose 1-epimerase (EC 5.1.3.-) (Uncharacterized protein) |
| MSMEG_4242 Conserved regulatory protein (Transcriptional regulatory protein) | MSMEG_0204 Uncharacterized protein |
| MSMEG_3495 MmpS5 protein | MSMEG_1112 Aconitate hydratase (EC 4.2.1.3) (Aconitate hydratase, putative) |
| MSMEG_3496 MmpL4 protein (Transmembrane transport protein MmpL1) | MSMEG_1178 Transcriptional regulator |
| MSMEG_4781 Uncharacterized protein | MSMEG_3580 Antigen 85-C (EC 2.3.1.-) |
| MSMEG_4782 Conserved hypothetical secreted protein (Uncharacterized protein) | MSMEG_2280 Pyruvate dehydrogenase (Thiamine pyrophosphate-requiring enzyme) |
| MSMEG_0090 Membrane protein-like protein (Uncharacterized protein) | MSMEG_0383 Rv1174c (Uncharacterized protein) |
| MSMEG_5499 Uncharacterized protein | MSMEG_3489 Uncharacterized protein |
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DamtR.without.N_rep2
M..smegmatis.Acid.NO.treated
Biological.replicate.3.of.7..falcarinol.treatment
X2XR.rep1
Wild.type.rep3
Biological.replicate.2.of.6..kanamycin.treatment
Wild.type.rep2.y
DglnR_without.vs..with.N_rep1
Wild.type.rep1.x
Biological.replicate.7.of.7..falcarinol.treatment
MB100pruR.vs..MB100.rep.2
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
Biological.replicate.1.of.6..negative.control
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
WT_log.phase_rep2
Biological.replicate.4.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
Biological.replicate.5.of.6..kanamycin.treatment
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
WT.vs..DamtR.N.surplus_rep1
Plogcy5plogcy3slide111norm
X3dbfcy5plogcy3slide601norm
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
X3dbfcy3plogcy5slide607norm
WT_log.phase_rep1
X2.5..vs..50..air.saturation.Replicate.1
Biological.replicate.2.of.7..panaxydol.treatment
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.5.of.7..ethambutol.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Slow.vs..Fast.Replicate.5
WT.vs..DamtR.N.surplus_dyeswap_rep2
Biological.replicate.6.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
X4dbfcy5plogcy3slide480norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.vs..DglnR.N_starvation_rep1
WT.vs..DglnR.N_starvation_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Wild.type.rep1.y
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
Plogcy5plogcy3slide113norm
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
X4dbfcy3plogcy5slide903norm
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