Module 304 Residual: 0.61
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.61 | 2.4e-17 | 0.000065 | 82 | 19 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 2.4e-17 | |
| Motif 2 |
 |
| e-value: 0.000065 |
| MSMEG_6923 Uncharacterized protein (Wyosine base formation) | MSMEG_6798 LacI-family transcriptional regulator (EC 5.1.1.1) (Ribose operon repressor) |
| MSMEG_6800 Phosphoribulokinase/uridine kinase | MSMEG_6801 Kinase, PfkB family (Kinase, pfkB family protein) |
| MSMEG_5370 ABC amino acid transporter, permease component (Ectoine/hydroxyectoine ABC transporter, permease protein EhuD) | MSMEG_6802 ABC transporter ATP-binding protein (ABC transporter related protein) |
| MSMEG_0391 Rmt3 protein | MSMEG_6803 Monosaccharide-transporting ATPase (EC 3.6.3.17) (Ribose transport system permease protein RbsC) |
| MSMEG_3020 Uncharacterized protein | MSMEG_6804 Periplasmic binding protein/LacI transcriptional regulator (EC 3.6.3.17) (Sugar ABC transporter substrate-binding protein) |
| MSMEG_6921 UPF0301 protein MSMEG_6921/MSMEI_6732 | MSMEG_5369 ABC amino acid transporter, permease component (Ectoine/hydroxyectoine ABC transporter, permease protein EhuC) |
| MSMEG_6922 Transporter, major facilitator family protein | MSMEG_5368 Ectoine/hydroxyectoine ABC transporter solute-binding protein |
| MSMEG_6721 Uncharacterized protein | MSMEG_6722 Uncharacterized protein |
| MSMEG_5371 ABC amino acid transporter, ATPase component (EC 3.6.3.21) (Ectoine/hydroxyectoine ABC transporter, ATP-binding protein) | MSMEG_6805 Beta-lactamase |
| MSMEG_6720 Epoxide hydrolase |
Wild.type.rep2.x
KO_stationary.phase_rep1
KO_stationary.phase_rep2
WT.vs..DglnR.N_starvation_rep2
WT.vs..DamtR.without.N_rep1
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.5.of.6..isoniazid.treatment
Biological.replicate.4.of.6..negative.control
Plogcy5plogcy3slide110norm
Biological.replicate.4.of.7..ethambutol.treatment
dosR.WT_Replicate3
dosR.WT_Replicate2
KO_log.phase_rep2
KO_log.phase_rep1
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
X3dbfcy5plogcy3slide601norm
Biological.replicate.7.of.7..falcarinol.treatment
MB100pruR.vs..MB100.rep.4
MB100pruR.vs..MB100.rep.2
WT.vs..DamtR.without.N_.dyeswap_rep1
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.6.of.7..panaxydol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.1
WT_log.phase_rep2
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
dosR.WT_Replicate4
mc2155.vs.Dcrp1.replicate.3
X3dbfcy3plogcy5slide607norm
Biological.replicate.3.of.6..negative.control
dcpA.knockout.rep1
Biological.replicate.2.of.7..falcarinol.treatment
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
stphcy3plogcy5slide581norm
WT_log.phase_rep1
WT.with.vs..without.N_dye.swap_rep1
X2.5..vs..50..air.saturation.Replicate.1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.2.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
Bedaquiline.vs..DMSO.60min
Biological.replicate.6.of.7..ethambutol.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
Biological.replicate.5.of.6..negative.control
X3dbfcy5plogcy3slide603norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
X4dbfcy5plogcy3slide901norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
Wild.type.rep1.x
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
Biological.replicate.1.of.6..negative.control
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
WT.vs..DglnR.N_starvation_dye.swap_rep2
WT.vs..DglnR.N_starvation_rep1
Biological.replicate.3.of.6..kanamycin.treatment
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
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