Module 313 Residual: 0.53
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.53 | 4.8e-27 | 4.1e-16 | 77 | 32 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 4.8e-27 | |
| Motif 2 |
 |
| e-value: 4.1e-16 |
| MSMEG_6136 Integral membrane protein TerC (Membrane protein, TerC family protein) | MSMEG_3001 Uncharacterized protein |
| MSMEG_3888 Transcriptional regulator-like protein (Uncharacterized protein) | MSMEG_0392 Putative glycosyl transferase (EC 2.-.-.-) |
| MSMEG_6566 Uncharacterized protein | MSMEG_6661 O-methyltransferase Omt (O-methyltransferase, putative) |
| MSMEG_3543 Soluble secreted antigen MPT53 | MSMEG_1078 Hydrolase |
| MSMEG_6568 Regulatory protein, LuxR, putative (Transcriptional regulator, LuxR family) | MSMEG_1079 Uncharacterized protein |
| MSMEG_6138 Metallopeptidase (Peptidase M1 membrane alanine aminopeptidase) | MSMEG_4703 Glycerol-3-phosphate acyltransferase (Putative acyltransferase plsB1) (EC 2.3.1.15) |
| MSMEG_2213 O-methyltransferase | MSMEG_4705 Diacylglycerol O-acyltransferase (EC 2.3.1.20) |
| MSMEG_0704 LpqJ protein (Putative lipoprotein LpqJ) | MSMEG_4704 Acyltransferase family protein |
| MSMEG_3541 Conserved integral membrane protein (Cytochrome C biogenesis protein transmembrane region) | MSMEG_5928 Uncharacterized protein |
| MSMEG_1456 Uncharacterized protein | MSMEG_5800 Amidophosphoribosyltransferase (ATase) (EC 2.4.2.14) (Glutamine phosphoribosylpyrophosphate amidotransferase) |
| MSMEG_1457 Uncharacterized protein | MSMEG_3186 Glycogen operon protein GlgX homolog (EC 3.2.1.-) |
| MSMEG_3498 Uncharacterized protein | MSMEG_3184 Malto-oligosyltrehalose trehalohydrolase (MTHase) (EC 3.2.1.141) (4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase) (Maltooligosyl trehalose trehalohydrolase) |
| MSMEG_1080 Large subunit of N,N-dimethylformamidase | MSMEG_0129 Cyclase/dehydrase family protein |
| MSMEG_5339 ABC-type branched-chain amino acid transport system, periplasmic component (Nitrile hydratase regulator1) | MSMEG_6137 Non-ribosomal peptide synthase (EC 5.1.1.11) (Non-ribosomal peptide synthetase) |
| MSMEG_5338 Regulatory protein, MarR (Transcriptional regulator, MarR family) | MSMEG_6580 Transcriptional regulator family protein (Transcriptional regulator, HxlR family) |
| MSMEG_3003 Aspartate--tRNA(Asp/Asn) ligase (EC 6.1.1.23) (Aspartyl-tRNA synthetase) (AspRS) (Non-discriminating aspartyl-tRNA synthetase) (ND-AspRS) | MSMEG_1235 Sulfate permease (Sulfate transporter) |
KO_stationary.phase_rep1
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
WT.vs..DamtR.without.N_rep2
Biological.replicate.4.of.6..negative.control
Wild.type.rep2.x
Biological.replicate.4.of.7..ethambutol.treatment
X2XR.rep1
Biological.replicate.4.of.6..kanamycin.treatment
KO_log.phase_rep1
Plogcy5plogcy3slide110norm
Wild.type.rep1.x
Biological.replicate.7.of.7..falcarinol.treatment
MB100pruR.vs..MB100.rep.4
MB100pruR.vs..MB100.rep.2
DglnR_without.vs..with.N_rep2
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.2.of.7..falcarinol.treatment
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.6.of.6..negative.control
Bedaquiline.vs..DMSO.15min
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
WT.vs..DamtR.without.N_.dyeswap_rep1
X0.6..vs..50..air.saturation.Replicate.1
WT_log.phase_rep2
X0.6..vs..50..air.saturation.Replicate.2
WT.vs..DglnR.N_starvation_dye.swap_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
Wild.type.rep2.y
stphcy3plogcy5slide581norm
WT.vs..DamtR.N.surplus_rep2
Biological.replicate.5.of.7..panaxydol.treatment
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DamtR.N.surplus_rep1
Plogcy5plogcy3slide111norm
Biological.replicate.2.of.6..isoniazid.treatment
X3dbfcy5plogcy3slide601norm
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
X3dbfcy3plogcy5slide607norm
WT_log.phase_rep1
DglnR_without.vs..with.N_rep1
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.4.of.6..isoniazid.treatment
X4XR.rep1
Slow.vs..Fast.Replicate.5
Biological.replicate.5.of.6..isoniazid.treatment
WT.vs..DamtR.N.surplus_dyeswap_rep2
Slow.vs..Fast.Replicate.2
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.5.of.6..negative.control
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
Biological.replicate.3.of.6..kanamycin.treatment
Wild.type.rep3
WT.vs..DamtR.N.surplus_.dyeswap_rep1
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DglnR.N_starvation_rep2
DglnR_without.vs..with.N_dyeswap_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
Wild.type.rep1.y
Biological.replicate.2.of.6..negative.control
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Sub.MIC.INH
BatchCulture_LBTbroth_StationaryPhase_Replicate3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Bedaquiline.vs..DMSO.120min
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