Module 316 Residual: 0.54
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.54 | 7.6e-19 | 0.0000000015 | 85 | 18 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 7.6e-19 | |
| Motif 2 |
 |
| e-value: 0.0000000015 |
| MSMEG_2106 Putative transcriptional regulator | MSMEG_5985 NAD dependent epimerase/dehydratase family protein (UDP-glucose 4-epimerase GalE1) |
| MSMEG_1850 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) (Selenocysteine synthase) (Selenocysteinyl-tRNA(Sec) synthase) | MSMEG_5986 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] |
| MSMEG_0192 Transcriptional regulator, RpiR family protein | MSMEG_1852 Selenide, water dikinase (EC 2.7.9.3) |
| MSMEG_0193 N-acetylmuramic acid 6-phosphate etherase (MurNAc-6-P etherase) (EC 4.2.1.126) (N-acetylmuramic acid 6-phosphate hydrolase) (N-acetylmuramic acid 6-phosphate lyase) | MSMEG_5982 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) |
| MSMEG_1849 Selenocysteine-specific translation elongation factor (Selenocysteine-specific translation elongation factor, SelB) | MSMEG_5983 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) |
| MSMEG_2108 Metal-dependent hydrolase-like protein (Uncharacterized protein) | MSMEG_6790 AP endonuclease, family protein 2 (Xylose isomerase-like TIM barrel) |
| MSMEG_6886 Transcriptional regulator (Transcriptional regulator, HxlR family) | MSMEG_6791 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) (3-hydroxybutyryl-CoA dehydrogenase) |
| MSMEG_6887 Amidohydrolase family protein | MSMEG_3582 Lon protease (EC 3.4.21.53) (ATP-dependent protease La) |
| MSMEG_5984 Undecaprenyl-phosphate galactosephosphotransferase | MSMEG_3581 FabG protein (Short-chain dehydrogenase/reductase SDR) |
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
WT.vs..DamtR.without.N_rep2
Biological.replicate.4.of.6..negative.control
Wild.type.rep2.x
Biological.replicate.4.of.6..isoniazid.treatment
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate1
WT.vs..DglnR.N_starvation_dye.swap_rep1
DglnR_without.vs..with.N_rep1
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
DglnR_without.vs..with.N_rep2
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.1.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.15min
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Biological.replicate.4.of.6..kanamycin.treatment
WT.vs..DamtR.without.N_.dyeswap_rep1
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.vs..DamtR.N.surplus_rep2
Biological.replicate.2.of.7..falcarinol.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
stphcy5plogcy3slide487norm
Wild.type.rep2.y
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
dcpA.knockout.rep2
dcpA.knockout.rep1
X4dbfcy5plogcy3slide480norm
Plogcy5plogcy3slide111norm
Biological.replicate.2.of.6..isoniazid.treatment
WT_log.phase_rep2
X2.5..vs..50..air.saturation.Replicate.5
X3dbfcy3plogcy5slide607norm
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
Biological.replicate.2.of.7..ethambutol.treatment
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
X4XR.rep1
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
Bedaquiline.vs..DMSO.60min
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Biological.replicate.7.of.7..panaxydol.treatment
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DamtR.N.surplus_dyeswap_rep2
X2XR.rep1
DglnR_without.vs..with.N_dyeswap_rep1
WT.vs..DglnR.N_starvation_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
Plogcy5plogcy3slide113norm
BatchCulture_LBTbroth_StationaryPhase_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Bedaquiline.vs..DMSO.120min
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