Module 321 Residual: 0.54
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.54 | 0.26 | 120 | 75 | 29 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.26 | |
| Motif 2 |
 |
| e-value: 120 |
| MSMEG_6227 Transcriptional regulator, PadR family protein | MSMEG_6536 Carboxymuconolactone decarboxylase (EC 4.1.1.44) |
| MSMEG_2486 Major facilitator superfamily protein | MSMEG_6537 Transcriptional regulator, TetR family protein |
| MSMEG_3134 Cytochrome P450 (Cytochrome P450 107B1) (EC 1.14.-.-) | MSMEG_0329 FMN oxidoreductase (Flavin-dependent reductase) |
| MSMEG_6777 Enoyl-CoA hydratase (EC 4.2.1.17) (Probable enoyl-CoA hydratase) (EC 4.2.1.17) | MSMEG_2485 Monooxygenase, FAD-binding |
| MSMEG_2990 Fe-S protein, radical SAM family protein | MSMEG_3430 Methyltransferase type 11 (SAM-dependent methyltransferase) |
| MSMEG_4643 Resuscitation-promoting factor | MSMEG_6285 DNA polymerase III gamma/tau subunit (EC 2.7.7.7) (DNA polymerase III subunit gamma/tau) |
| MSMEG_1431 Cytochrome P450-terp (EC 1.14.-.-) | MSMEG_3128 Uncharacterized protein |
| MSMEG_1432 Carboxylic ester hydrolase (EC 3.1.1.-) | MSMEG_3985 Integral membrane transport protein (Putative alpha-ketoglutarate permease) |
| MSMEG_1434 Uncharacterized protein | MSMEG_0611 Carboxylic ester hydrolase (EC 3.1.1.-) |
| MSMEG_5811 Transcriptional regulator, TetR family protein | MSMEG_0610 Beta-lactamase (Beta-lactamase-like protein) |
| MSMEG_2776 1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) | MSMEG_1506 TetR-family transcriptional regulator (Transcriptional regulator, TetR family protein) |
| MSMEG_2775 Na(+)/H(+) antiporter NhaA (Sodium/proton antiporter NhaA) | MSMEG_1507 D-aminopeptidase (Peptidase S58 DmpA (D-aminopeptidase)) (EC 3.4.11.19) |
| MSMEG_4244 Phospho-2-dehydro-3-deoxyheptonate aldolase AroG (EC 2.5.1.54) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) (DAHP synthase) (Phospho-2-keto-3-deoxyheptonate aldolase) | MSMEG_2425 Ammonium transporter |
| MSMEG_4245 3'-5' exoribonuclease (EC 3.1.13.-) | MSMEG_3586 Major facilitator family protein transporter (Major facilitator superfamily MFS_1) |
| MSMEG_5212 Uncharacterized protein |
Bedaquiline.vs..DMSO.30min
Biological.replicate.5.of.7..falcarinol.treatment
Biological.replicate.2.of.7..panaxydol.treatment
M..smegmatis.Acid.NO.treated
Mycobacterium.smegmatis.Spheroplast.induced
X4XR.rep1
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.2.of.7..falcarinol.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
dosR.WT_Replicate1
KO_log.phase_rep2
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Wild.type.rep1.x
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
Biological.replicate.6.of.6..negative.control
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
Biological.replicate.2.of.6..kanamycin.treatment
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
Biological.replicate.5.of.6..isoniazid.treatment
mc2155.vs.Dcrp1.replicate.1
dcpA.knockout.rep1
WT.vs..DamtR.N.surplus_rep1
Biological.replicate.2.of.6..isoniazid.treatment
X3dbfcy5plogcy3slide601norm
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.4.of.7..panaxydol.treatment
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
WT.with.vs..without.N_dye.swap_rep2
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
dosR.WT_Replicate2
Slow.vs..Fast.Replicate.4
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Biological.replicate.6.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.with.vs..without.N_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.3.of.6..kanamycin.treatment
X2XR.rep1
X2XR.rep2
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.2.of.6..negative.control
BatchCulture_LBTbroth_StationaryPhase_Replicate4
Sub.MIC.INH
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
Biological.replicate.4.of.6..isoniazid.treatment
X4dbfcy3plogcy5slide903norm
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.120min
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