Module 322 Residual: 0.59
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.59 | 7.5e-24 | 0.00079 | 80 | 24 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 7.5e-24 | |
| Motif 2 |
 |
| e-value: 0.00079 |
| MSMEG_6863 Class II aldolase/adducin (Class II aldolase/adducin domain protein) | MSMEG_5158 Sensor histidine kinase (Two-component system sensor kinase) |
| MSMEG_4449 Putative transcriptional regulator | MSMEG_4451 Monooxygenase (Probable monooxygenase) (EC 1.14.13.-) |
| MSMEG_3194 Biotin synthase (EC 2.8.1.6) | MSMEG_4450 Alpha/beta hydrolase |
| MSMEG_3446 Uncharacterized protein | MSMEG_2178 Integral membrane protein |
| MSMEG_3960 Transcriptional regulator | MSMEG_4989 Sensor histidine kinase |
| MSMEG_3193 TetR family transcriptional regulator (Transcriptional regulator, TetR family protein) | MSMEG_2462 Carbon-monoxide dehydrogenase |
| MSMEG_4486 Transcriptional regulator, ArsR family protein | MSMEG_2463 Carbon-monoxide dehydrogenase (EC 1.2.99.2) (Nicotine dehydrogenase chain A) |
| MSMEG_4487 Ferric uptake regulation protein (Zinc uptake regulator, Fur family) | MSMEG_2460 Transporter permease 1 |
| MSMEG_4485 Glycine--tRNA ligase (EC 6.1.1.14) (Glycyl-tRNA synthetase) | MSMEG_2461 Binding-protein-dependent transport systems inner membrane component (Transporter permease 2, putative) |
| MSMEG_2459 ABC transporter (Transporter ATPase) | MSMEG_3959 GntR family transcriptional regulator (Transcriptional regulator) |
| MSMEG_2458 Putative substrate-binding protein, ABC-type transporter (Uncharacterized protein) | MSMEG_2464 [2Fe-2S] binding domain protein |
| MSMEG_5159 DNA-binding response regulator, putative (Response regulator, two-component system) (EC 3.1.1.61) | MSMEG_3813 NAD-dependent epimerase/dehydratase |
Wild.type.rep2.x
KO_stationary.phase_rep1
KO_stationary.phase_rep2
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Bedaquiline.vs..DMSO.15min
Biological.replicate.4.of.6..negative.control
dosR.WT_Replicate4
Biological.replicate.3.of.7..falcarinol.treatment
rel.knockout.rep2
Biological.replicate.1.of.6..negative.control
Wild.type.rep3
dosR.WT_Replicate2
KO_log.phase_rep2
KO_log.phase_rep1
DglnR_without.vs..with.N_rep1
Wild.type.rep1.x
Biological.replicate.7.of.7..falcarinol.treatment
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.2.of.7..falcarinol.treatment
rel.knockout.rep1
WT.vs..DamtR.N.surplus_.dyeswap_rep1
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.1
X3dbfcy5plogcy3slide601norm
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
stphcy5plogcy3slide487norm
Biological.replicate.7.of.7..panaxydol.treatment
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
WT.vs..DamtR.N.surplus_rep2
Biological.replicate.5.of.7..panaxydol.treatment
Biological.replicate.2.of.6..isoniazid.treatment
WT.vs..DamtR.N.surplus_rep1
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
WT_log.phase_rep2
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
stphcy3plogcy5slide581norm
Biological.replicate.4.of.7..panaxydol.treatment
Biological.replicate.2.of.7..ethambutol.treatment
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.2.of.7..panaxydol.treatment
X4XR.rep2
Biological.replicate.5.of.7..ethambutol.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Slow.vs..Fast.Replicate.5
Bedaquiline.vs..DMSO.60min
Biological.replicate.4.of.7..falcarinol.treatment
Biological.replicate.5.of.6..isoniazid.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
Biological.replicate.5.of.6..negative.control
Biological.replicate.5.of.6..kanamycin.treatment
X4dbfcy5plogcy3slide901norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
Sub.MIC.INH
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
Biological.replicate.2.of.6..negative.control
Bedaquiline.vs..DMSO..45min
Biological.replicate.3.of.6..negative.control
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