Module 336 Residual: 0.53
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.53 | 0.0000000019 | 0.0000000011 | 77 | 28 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000000019 | |
| Motif 2 |
 |
| e-value: 0.0000000011 |
| MSMEG_6170 Uncharacterized protein | MSMEG_6145 Uncharacterized protein |
| MSMEG_6019 ABC-type sugar transport system ATPase component (Putative sugar ABC transporter ATP-binding protein) (EC 3.6.3.17) | MSMEG_6144 Pe family protein |
| MSMEG_3350 TRAP dicarboxylate transporter, DctM subunit (TRAP transporter, DctM-like membrane protein) | MSMEG_5600 Uncharacterized protein |
| MSMEG_0436 Allophanate hydrolase subunit 1 | MSMEG_1711 ATP binding protein of ABC transporter |
| MSMEG_0435 Allophanate hydrolase subunit 2 (Urea amidolyase related protein) (EC 3.5.1.54) | MSMEG_1710 Ribose transport system permease protein RbsC (EC 3.6.3.17) |
| MSMEG_1708 LacI-type transcriptional regulator (EC 5.1.1.1) (Ribose operon repressor, putative) | MSMEG_1712 ABC transporter periplasmic-binding protein YtfQ |
| MSMEG_6018 Xylose transport system permease protein XylH (EC 3.6.3.17) | MSMEG_6022 Xylose repressor, ROK-family protein transcriptional regulator |
| MSMEG_1707 HAD-superfamily hydrolase, subfamily IA, variant 3 (EC 3.1.3.68) (Phosphatase YfbT) (EC 3.1.3.-) | MSMEG_6020 D-xylose-binding periplasmic protein (EC 3.6.3.17) (Periplasmic binding protein/LacI transcriptional regulator) |
| MSMEG_4299 Enoyl-CoA hydratase/isomerase (EC 4.2.1.17) | MSMEG_6021 Xylose isomerase (EC 5.3.1.5) |
| MSMEG_5248 Acyl-[ACP] desaturase (Acyl-acyl-carrier protein desaturase DesA2) (EC 1.14.19.2) | MSMEG_0102 Putative acyl-CoA dehydrogenase |
| MSMEG_5089 Uncharacterized protein | MSMEG_1709 Inner membrane ABC transporter permease protein YjfF |
| MSMEG_3349 Trap dicarboxylate transporter, dctq subunit, putative (TrapT family, DctQ subunit, C4-dicarboxylate transport) | MSMEG_0100 Phosphotyrosine protein phosphatase PtpB (EC 3.1.3.48) (Phosphotyrosine protein phosphatase ptpb) |
| MSMEG_5645 Uncharacterized protein | MSMEG_6822 Beta-lactamase (Putative conserved alanine rich lipoprotein LppW) |
| MSMEG_5644 Membrane protein | MSMEG_6821 NLP/P60 family protein |
KO_stationary.phase_rep1
WT.vs..DamtR.without.N_rep1
Biological.replicate.2.of.7..panaxydol.treatment
dcpA.knockout.rep2
DamtR.with.vs..DamtR.without.N_.rep1
dosR.WT_Replicate4
Biological.replicate.4.of.7..ethambutol.treatment
Wild.type.rep3
MB100pruR.vs..MB100..rep.3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Biological.replicate.4.of.6..kanamycin.treatment
KO_log.phase_rep1
Biological.replicate.7.of.7..falcarinol.treatment
Wild.type.rep1.x
Wild.type.rep1.y
Biological.replicate.3.of.7..panaxydol.treatment
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.3.of.6..kanamycin.treatment
rel.knockout.rep1
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.15min
WT_log.phase_rep2
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X3dbfcy5plogcy3slide601norm
X0.6..vs..50..air.saturation.Replicate.3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
stphcy5plogcy3slide487norm
Slow.vs..Fast.Replicate.3
Biological.replicate.1.of.7..panaxydol.treatment
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
X4dbfcy5plogcy3slide901norm
Biological.replicate.5.of.7..panaxydol.treatment
WT.vs..DamtR.N.surplus_rep1
Plogcy5plogcy3slide111norm
Biological.replicate.5.of.6..negative.control
X2.5..vs..50..air.saturation.Replicate.4
stphcy3plogcy5slide581norm
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.2.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.4
Bedaquiline.vs..DMSO.60min
Biological.replicate.5.of.6..isoniazid.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.vs..DglnR.N_starvation_rep1
WT.vs..DglnR.N_starvation_rep2
X2XR.rep1
X2XR.rep2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Plogcy5plogcy3slide113norm
BatchCulture_LBTbroth_StationaryPhase_Replicate3
mc2155.vs.Dcrp1.replicate.1
BatchCulture_LBTbroth_StationaryPhase_Replicate1
dosR.WT_Replicate2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
X4dbfcy3plogcy5slide903norm
WT.vs..DamtR.N.surplus_rep2
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