Module 338 Residual: 0.52
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.52 | 0.00034 | 0.0045 | 76 | 29 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.00034 | |
| Motif 2 |
 |
| e-value: 0.0045 |
| MSMEG_3171 Uncharacterized protein | MSMEG_2454 Translation initiation inhibitor |
| MSMEG_3334 Uncharacterized protein | MSMEG_4364 Uncharacterized protein |
| MSMEG_5551 Stas domain protein | MSMEG_6947 Chromosomal replication initiator protein DnaA |
| MSMEG_1822 Biotin-[acetyl-CoA-carboxylase] ligase (EC 6.3.4.15) (Putative biotin--acetyl-CoA-carboxylase ligase (BirA bifunctional protein)) (EC 6.3.4.15) | MSMEG_0798 Uncharacterized protein |
| MSMEG_1821 Acyl-CoA dehydrogenase (EC 1.3.99.-) (Putative acyl-CoA dehydrogenase fadE25) (EC 1.3.8.1) | MSMEG_0799 Uncharacterized protein |
| MSMEG_3031 Shikimate kinase (SK) (EC 2.7.1.71) | MSMEG_6892 Replicative DNA helicase (EC 3.6.4.12) |
| MSMEG_3033 3-dehydroquinate synthase (EC 4.2.3.4) | MSMEG_2789 Acetyltransferase, GNAT family protein (GCN5-related N-acetyltransferase) |
| MSMEG_3429 Acyltransferase 3 (O-acyl transferase) | MSMEG_6559 Uncharacterized protein |
| MSMEG_3563 Drug resistance transporter EmrB/QacA subfamily (Drug transporter) | MSMEG_6513 Major facilitator superfamily MFS_1 (Membrane transport protein) |
| MSMEG_1380 Transcriptional regulator (Transcriptional regulator, TetR family) | MSMEG_0913 Methoxy mycolic acid synthase 1 (EC 2.1.1.-) (Mycolic acid synthase UmaA) (EC 2.1.1.79) |
| MSMEG_1518 Uncharacterized protein | MSMEG_0148 Transcriptional regulator, TetR family protein |
| MSMEG_2453 Transcriptional regulator, GntR family (Transcriptional regulator, GntR family protein) | MSMEG_0449 Drug resistance transporter EmrB/QacA subfamily (Transporter, major facilitator family protein, putative) |
| MSMEG_5155 Nitroreductase (EC 1.6.99.3) | MSMEG_3030 Chorismate synthase (CS) (EC 4.2.3.5) (5-enolpyruvylshikimate-3-phosphate phospholyase) |
| MSMEG_5154 Uncharacterized protein | MSMEG_2429 Aldo/keto reductase (EC 1.1.1.65) |
| MSMEG_2457 Uncharacterized protein |
KO_stationary.phase_rep1
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
Biological.replicate.2.of.7..panaxydol.treatment
WT.vs..DamtR.without.N_rep2
X4XR.rep1
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.1.of.6..negative.control
dosR.WT_Replicate3
dosR.WT_Replicate1
Biological.replicate.4.of.6..kanamycin.treatment
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Wild.type.rep2.x
MB100pruR.vs..MB100.rep.4
MB100pruR.vs..MB100.rep.2
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..kanamycin.treatment
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.5.of.6..isoniazid.treatment
Biological.replicate.6.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.15min
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X3dbfcy5plogcy3slide601norm
WT.vs..DamtR.N.surplus_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
Plogcy5plogcy3slide113norm
Biological.replicate.5.of.6..kanamycin.treatment
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
Biological.replicate.3.of.6..negative.control
dcpA.knockout.rep1
Biological.replicate.2.of.7..falcarinol.treatment
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
stphcy3plogcy5slide581norm
X2.5..vs..50..air.saturation.Replicate.1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.5
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
Biological.replicate.5.of.6..negative.control
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
Biological.replicate.3.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
X4dbfcy5plogcy3slide901norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
WT.vs..DglnR.N_starvation_rep1
WT.vs..DglnR.N_starvation_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X2XR.rep2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
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