Module 349 Residual: 0.56
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.56 | 1.4e-28 | 0.0000013 | 91 | 18 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 1.4e-28 | |
| Motif 2 |
 |
| e-value: 0.0000013 |
| MSMEG_6637 Uncharacterized protein | MSMEG_2539 Putative benzoquinone methyltransferase (Thiopurine S-methyltransferase (Tpmt) superfamily protein) |
| MSMEG_6636 Superoxide dismutase (EC 1.15.1.1) | MSMEG_2909 Mandelate racemase/muconate lactonizing enzyme (Starvation-sensing protein RspA) |
| MSMEG_6174 Transcriptional regulator, IclR family (Transcriptional regulator, IclR family protein) | MSMEG_2908 2-Keto-3-deoxy-gluconate kinase (Kinase, PfkB family) (EC 2.7.1.-) |
| MSMEG_6175 2-keto-3-deoxy-galactonokinase (2-keto-3-deoxy-galactonokinase (2-dehydro-3-deoxygalactonokinase)) (EC 2.7.1.58) | MSMEG_1171 Low molecular weight phosphotyrosine protein phosphatase (Putative arsenate reductase ArsC) (EC 1.20.4.1) |
| MSMEG_6176 2-dehydro-3-deoxy-6-phosphogalactonate aldolase (EC 4.1.2.21) (KDPG and KHG aldolase) | MSMEG_1173 ArsR family transcriptional regulator (Transcriptional regulator, ArsR family protein) |
| MSMEG_6177 Galactonate dehydratase (EC 4.2.1.6) (Mandelate racemase/muconate lactonizing protein (Galactonate dehydratase)) | MSMEG_1172 Arsenic-transport integral membrane protein ArsC (EC 1.20.4.1) (Arsenical-resistance protein) |
| MSMEG_6178 D-galactonate transporter (Major facilitator superfamily MFS_1) | MSMEG_1175 Putative transcriptional regulatory protein (Putative transcriptional regulatory protein (Probably arsR-family)) |
| MSMEG_2907 Mannitol dehydrogenase domain protein (Putative oxidoreductase YeiQ) (EC 1.-.-.-) | MSMEG_1174 Cadmium inducible protein cadi (Putative glyoxalase/bleomycin resistance or cadmium-induced protein CadI) |
| MSMEG_2538 MarR-family protein transcriptional regulator | MSMEG_2910 GntR family transcriptional regulator (Transcriptional regulator, GntR family protein) |
KO_stationary.phase_rep1
Biological.replicate.4.of.6..isoniazid.treatment
MB100pruR.vs..MB100.rep.4
MB100pruR.vs..MB100.rep.2
MB100pruR.vs..MB100.rep.1
Biological.replicate.6.of.7..panaxydol.treatment
DamtR.with.vs..DamtR.without.N_.rep2
WT.vs..DamtR.N.surplus_rep2
WT.vs..DamtR.N.surplus_rep1
stphcy5plogcy3slide487norm
stphcy5plogcy3slide580norm
Biological.replicate.2.of.7..ethambutol.treatment
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.4.of.7..falcarinol.treatment
Biological.replicate.6.of.7..ethambutol.treatment
X4dbfcy5plogcy3slide901norm
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
dosR.WT_Replicate2
dosR.WT_Replicate1
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.2.of.7..falcarinol.treatment
Biological.replicate.1.of.7..panaxydol.treatment
stphcy3plogcy5slide581norm
WT.with.vs..without.N_dye.swap_rep1
Biological.replicate.6.of.6..isoniazid.treatment
Bedaquiline.vs..DMSO.60min
WT.vs..DglnR.N_starvation_dye.swap_rep1
Biological.replicate.7.of.7..panaxydol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
WT.vs..DglnR.N_starvation_rep2
X2XR.rep1
X2XR.rep2
Sub.MIC.INH
rel.knockout.rep2
Mycobacterium.smegmatis.Spheroplast.induced
MB100pruR.vs..MB100..rep.3
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
DglnR_without.vs..with.N_rep1
DglnR_without.vs..with.N_rep2
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.6..kanamycin.treatment
rel.knockout.rep1
M..smegmatis.Acid.NO.treated
Biological.replicate.3.of.6..isoniazid.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.2.of.6..isoniazid.treatment
X4dbfcy5plogcy3slide480norm
WT.vs..DamtR.N.surplus_.dyeswap_rep1
Plogcy5plogcy3slide113norm
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.5.of.7..falcarinol.treatment
KO_log.phase_rep2
Wild.type.rep1.y
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Wild.type.rep3
BatchCulture_LBTbroth_StationaryPhase_Replicate4
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
mc2155.vs.Dcrp1.replicate.2
mc2155.vs.Dcrp1.replicate.1
mc2155.vs.Dcrp1.replicate.4
Biological.replicate.5.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.4
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
X4XR.rep2
X4XR.rep1
Slow.vs..Fast.Replicate.4
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
X3dbfcy5plogcy3slide603norm
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.with.vs..without.N_rep1
Biological.replicate.1.of.6..negative.control
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
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