Module 358 Residual: 0.51Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Summary

Residual	Motif 1 e-value	Motif 2 e-value	Conditions	Genes	version
0.51	0.019	38	86	13	20160204

Motifs

Motif 1
	e-value: 0.019
Motif 2
	e-value: 38

Module Plots

Members

MSMEG_2350 Probable S-adenosylmethionine-dependent methyltransferase MSMEG_2350/MSMEI_2290 (EC 2.1.1.-)	MSMEG_1483 Protein translocase subunit SecY
MSMEG_1479 Putative S-adenosyl-L-methionine-dependent methyltransferase MSMEG_1479/MSMEI_1443 (EC 2.1.1.-)	MSMEG_1482 Putative S-adenosyl-L-methionine-dependent methyltransferase MSMEG_1482/MSMEI_1446 (EC 2.1.1.-)
MSMEG_2352 Electron transfer flavoprotein, alpha subunit	MSMEG_5546 Conserved membrane protein (Membrane spanning protein)
MSMEG_1485 Methionine aminopeptidase (MAP) (MetAP) (EC 3.4.11.18) (Peptidase M)	MSMEG_2349 Glycoside hydrolase, family 57 (Glycosyl hydrolase, family protein 57)
MSMEG_1484 Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)	MSMEG_5548 Precorrin-6A synthase (Deacetylating) (Precorrin-6A synthase deacetylating) (EC 2.1.1.152)
MSMEG_1481 Putative S-adenosyl-L-methionine-dependent methyltransferase MSMEG_1481/MSMEI_1445 (EC 2.1.1.-)	MSMEG_2351 Electron transfer flavoprotein beta subunit (Electron transfer flavoprotein, beta subunit)
MSMEG_1480 Putative S-adenosyl-L-methionine-dependent methyltransferase MSMEG_1480/MSMEI_1444 (EC 2.1.1.-)

Conditions

KO_stationary.phase_rep1

Biological.replicate.4.of.7..ethambutol.treatment

Wild.type.rep2.x

MB100pruR.vs..MB100.rep.4

Biological.replicate.5.of.7..panaxydol.treatment

Bedaquiline.vs..DMSO..45min

Biological.replicate.6.of.7..panaxydol.treatment

DamtR.with.vs..DamtR.without.N_.rep1

WT.vs..DamtR.N.surplus_rep2

stphcy5plogcy3slide487norm

Biological.replicate.6.of.7..ethambutol.treatment

Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.

WT.vs..DamtR.without.N_rep2

Biological.replicate.4.of.6..negative.control

dosR.WT_Replicate3

dosR.WT_Replicate1

Biological.replicate.2.of.7..panaxydol.treatment

dosR.WT_Replicate4

Biological.replicate.3.of.7..panaxydol.treatment

Biological.replicate.1.of.6..kanamycin.treatment

Biological.replicate.3.of.6..negative.control

WT_log.phase_rep2

WT.with.vs..without.N_dye.swap_rep1

WT.with.vs..without.N_dye.swap_rep2

M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3

WT.vs..DglnR.N_starvation_dye.swap_rep1

WT.vs..DglnR.N_starvation_dye.swap_rep2

Biological.replicate.7.of.7..panaxydol.treatment

mc2155.pMind..vs.mc2155.pMind.6189.replicate.4

mc2155.pMind..vs.mc2155.pMind.6189.replicate.2

mc2155.pMind..vs.mc2155.pMind.6189.replicate.3

mc2155.pMind..vs.mc2155.pMind.6189.replicate.1

WT.vs..DglnR.N_starvation_rep1

WT.vs..DglnR.N_starvation_rep2

Bedaquiline.vs..DMSO.15min

MB100pruR.vs..MB100..rep.3

Biological.replicate.3.of.6..isoniazid.treatment

Biological.replicate.6.of.6..kanamycin.treatment

Biological.replicate.3.of.6..kanamycin.treatment

Biological.replicate.1.of.7..falcarinol.treatment

Biological.replicate.6.of.7..falcarinol.treatment

Biological.replicate.4.of.6..kanamycin.treatment

M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1

M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3

M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2

Biological.replicate.5.of.6..kanamycin.treatment

Biological.replicate.2.of.6..isoniazid.treatment

BatchCulture_LBTbroth_ExponentialPhase_Replicate3

BatchCulture_LBTbroth_ExponentialPhase_Replicate4

WT.vs..DamtR.N.surplus_.dyeswap_rep1

Biological.replicate.2.of.6..negative.control

M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1

Bedaquiline.vs..DMSO.30min

Biological.replicate.5.of.7..falcarinol.treatment

KO_log.phase_rep2

KO_log.phase_rep1

Wild.type.rep1.x

WT.vs..DamtR.without.N_.dyeswap_rep2

Biological.replicate.1.of.6..isoniazid.treatment

Biological.replicate.3.of.7..falcarinol.treatment

Wild.type.rep3

Biological.replicate.3.of.7..ethambutol.treatment

X0.6..vs..50..air.saturation.Replicate.1

X0.6..vs..50..air.saturation.Replicate.3

X0.6..vs..50..air.saturation.Replicate.2

X0.6..vs..50..air.saturation.Replicate.5

mc2155.vs.Dcrp1.replicate.3

mc2155.vs.Dcrp1.replicate.1

dcpA.knockout.rep2

dcpA.knockout.rep1

X2.5..vs..50..air.saturation.Replicate.4

Biological.replicate.4.of.7..panaxydol.treatment

X2.5..vs..50..air.saturation.Replicate.1

DamtR.with.vs..DamtR.without.N_dyeswap_.rep1

X4XR.rep2

X4XR.rep1

Slow.vs..Fast.Replicate.4

Slow.vs..Fast.Replicate.5

Slow.vs..Fast.Replicate.3

Biological.replicate.5.of.6..negative.control

WT.vs..DamtR.N.surplus_dyeswap_rep2

WT.with.vs..without.N_rep2

WT.with.vs..without.N_rep1

Biological.replicate.1.of.6..negative.control

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1

Biological.replicate.2.of.6..kanamycin.treatment

Comments