Module 361 Residual: 0.55
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.55 | 0.0000000000042 | 1.2 | 79 | 25 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000000000042 | |
| Motif 2 |
 |
| e-value: 1.2 |
| MSMEG_5446 Para-aminobenzoate synthase, component I (EC 4.1.3.-) (Para-aminobenzoate synthase, subunit I) (EC 2.6.1.85) | MSMEG_2946 Transmembrane protein (Uncharacterized protein) |
| MSMEG_6404 UDP-galactopyranose mutase (UDP-galactopyranose mutase Glf) (EC 5.4.99.9) | MSMEG_5526 Peptidoglycan-binding LysM |
| MSMEG_6405 Erp protein (Uncharacterized protein) | MSMEG_5527 Uncharacterized protein |
| MSMEG_6401 Decaprenyl-phosphate phosphoribosyltransferase (EC 2.4.2.45) (5-phospho-alpha-D-ribose-1-diphosphate:decaprenyl-phosphate 5-phosphoribosyltransferase) (DPPR synthase) | MSMEG_0851 Arsenic-transport integral membrane protein ArsA (Citrate transporter) |
| MSMEG_6402 Putative decaprenylphosphoryl-5-phosphoribose phosphatase MSMEG_6402 (DPPR phosphatase) (EC 3.1.3.-) (Phospholipid phosphatase) | MSMEG_6142 UDP-glucose 4-epimerase (EC 5.1.3.2) (UDP-galactose 4-epimerase) (Uridine diphosphate galactose 4-epimerase) |
| MSMEG_6403 Galactofuranosyl transferase GlfT2 (GalTr) (EC 2.4.1.288) (Beta-D-(1->5)galactofuranosyltransferase) (Beta-D-(1->6)galactofuranosyltransferase) (Galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase) (UDP-Galf:alpha-3-L-rhamnosyl-alpha-D-GlcNAc-pyrophosphate polyprenol, UDP-galactofuranosyl transferase) | MSMEG_4142 Transcriptional repressor, TetR family protein, putative |
| MSMEG_1103 o-succinylbenzoate synthase (OSB synthase) (OSBS) (EC 4.2.1.113) (4-(2'-carboxyphenyl)-4-oxybutyric acid synthase) (o-succinylbenzoic acid synthase) | MSMEG_1011 Short chain dehydrogenase (Short-chain dehydrogenase/reductase SDR) |
| MSMEG_2291 | MSMEG_5847 Adenylosuccinate lyase (ASL) (EC 4.3.2.2) (Adenylosuccinase) |
| MSMEG_2433 D-alanyl-D-alanine carboxypeptidase (Putative D-alanyl-D-alanine carboxypeptidase Dacb2 (Penicillin-binding protein)) (EC 3.4.16.4) | MSMEG_5846 Cytochrome P450 126 cyp126 (EC 1.14.13.151) (NikQ protein) |
| MSMEG_2432 D-alanyl-D-alanine carboxypeptidase (Putative D-alanyl-D-alanine carboxypeptidase Dacb2) (EC 3.4.16.4) | MSMEG_6806 Excinuclease ABC (Excinuclease ABC, A subunit) |
| MSMEG_2943 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC) | MSMEG_0124 GntR family regulatory protein (Transcriptional regulator, GntR family protein) |
| MSMEG_2945 Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12) | MSMEG_0126 Mandelate racemase/muconate lactonizing enzyme (Mandelate racemase/muconate lactonizing protein) (EC 5.1.2.2) |
| MSMEG_2944 Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12) |
Bedaquiline.vs..DMSO.30min
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.3.of.6..kanamycin.treatment
WT.vs..DamtR.without.N_rep2
Biological.replicate.4.of.6..negative.control
dosR.WT_Replicate4
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.1.of.6..negative.control
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate2
dosR.WT_Replicate1
KO_log.phase_rep2
KO_log.phase_rep1
DglnR_without.vs..with.N_rep1
X3dbfcy5plogcy3slide601norm
Wild.type.rep1.y
DglnR_without.vs..with.N_rep2
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.6..isoniazid.treatment
rel.knockout.rep2
rel.knockout.rep1
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.5.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.4.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.1
WT_log.phase_rep2
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
mc2155.vs.Dcrp1.replicate.2
mc2155.vs.Dcrp1.replicate.3
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
Sub.MIC.INH
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
Biological.replicate.2.of.6..kanamycin.treatment
WT_stationary.phase_rep1
X4XR.rep2
X4XR.rep1
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Slow.vs..Fast.Replicate.5
Bedaquiline.vs..DMSO.60min
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.7.of.7..panaxydol.treatment
Biological.replicate.5.of.6..negative.control
X3dbfcy5plogcy3slide603norm
Biological.replicate.5.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
Wild.type.rep3
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DglnR.N_starvation_rep2
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep1
WT.vs..DglnR.N_starvation_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Biological.replicate.3.of.6..negative.control
WT.vs..DglnR.N_starvation_dye.swap_rep1
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