Module 368 Residual: 0.49
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.49 | 2.3e-30 | 0.00000000054 | 86 | 15 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 2.3e-30 | |
| Motif 2 |
 |
| e-value: 0.00000000054 |
| MSMEG_5480 Uncharacterized protein | MSMEG_2602 Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3) (Protocatechuate 3,4-dioxygenase, alpha subunit) |
| MSMEG_5482 Large-conductance mechanosensitive channel | MSMEG_2603 3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) |
| MSMEG_6048 Cobalamin synthesis protein P47K (Cobalamin synthesis protein/P47K) | MSMEG_2600 Regulatory protein |
| MSMEG_0447 Organic hydroperoxide resistance protein, osmC family (EC 4.6.1.1) (Uncharacterized protein) | MSMEG_2601 Protocatechuate 3,4-dioxygenase bata subunit (Protocatechuate 3,4-dioxygenase, beta subunit) (EC 1.13.11.3) |
| MSMEG_6045 ABC heavy metal transporter, inner membrane subunit (ABC-3) | MSMEG_5162 Cinnamoyl ester hydrolase (Transcriptional regulator, HxlR family) |
| MSMEG_6046 ABC transporter related protein (Cation ABC transporter, ATP-binding protein, putative) | MSMEG_5163 ABC proline/glycine betaine family protein transporter, periplasmic ligand binding protein (Putative ABC-type proline/glycine betaine transport protein) |
| MSMEG_6047 Cation ABC transporter, periplasmic cation-binding protein, putative | MSMEG_2604 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase (EC 4.1.1.44) (4-carboxymuconolactone decarboxylase) (EC 4.1.1.44) |
| MSMEG_0448 Transcriptional regulator, MarR family (Transcriptional regulator, MarR family protein) |
Biological.replicate.4.of.6..isoniazid.treatment
Wild.type.rep2.y
Wild.type.rep2.x
MB100pruR.vs..MB100.rep.4
Biological.replicate.5.of.7..panaxydol.treatment
Biological.replicate.1.of.7..falcarinol.treatment
WT.vs..DamtR.N.surplus_rep1
X3dbfcy5plogcy3slide601norm
X3dbfcy3plogcy5slide607norm
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.4.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
WT.vs..DamtR.without.N_rep2
Plogcy5plogcy3slide110norm
Biological.replicate.2.of.7..panaxydol.treatment
dosR.WT_Replicate4
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.2.of.7..falcarinol.treatment
Biological.replicate.1.of.7..panaxydol.treatment
WT_log.phase_rep2
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.5.of.7..ethambutol.treatment
Bedaquiline.vs..DMSO.60min
WT.vs..DglnR.N_starvation_dye.swap_rep1
Biological.replicate.7.of.7..panaxydol.treatment
WT.vs..DglnR.N_starvation_rep1
WT.vs..DglnR.N_starvation_rep2
X2XR.rep2
Sub.MIC.INH
X4dbfcy3plogcy5slide903norm
MB100pruR.vs..MB100..rep.3
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Slow.vs..Fast.Replicate.5
rel.knockout.rep1
Biological.replicate.6.of.7..falcarinol.treatment
M..smegmatis.Acid.NO.treated
Biological.replicate.3.of.6..isoniazid.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
Biological.replicate.5.of.6..kanamycin.treatment
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.2.of.6..isoniazid.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
Plogcy5plogcy3slide113norm
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Bedaquiline.vs..DMSO.30min
KO_log.phase_rep1
Wild.type.rep1.x
Wild.type.rep1.y
WT.vs..DamtR.without.N_.dyeswap_rep1
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.3.of.7..ethambutol.treatment
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
mc2155.vs.Dcrp1.replicate.2
Biological.replicate.2.of.7..ethambutol.treatment
mc2155.vs.Dcrp1.replicate.4
dcpA.knockout.rep2
dcpA.knockout.rep1
Plogcy5plogcy3slide111norm
X2.5..vs..50..air.saturation.Replicate.5
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.3
X4XR.rep2
X4XR.rep1
Slow.vs..Fast.Replicate.4
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
Biological.replicate.5.of.6..negative.control
WT.vs..DamtR.N.surplus_dyeswap_rep2
DglnR_without.vs..with.N_dyeswap_rep2
Biological.replicate.1.of.6..negative.control
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
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