Module 373 Residual: 0.54
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.54 | 0.00001 | 0.0039 | 85 | 18 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.00001 | |
| Motif 2 |
 |
| e-value: 0.0039 |
| MSMEG_6209 Uncharacterized protein | MSMEG_0176 Glutamine ABC transporter periplasmic-binding protein |
| MSMEG_5080 Glycogen synthase (Glycosyltransferase) (EC 2.4.1.21) | MSMEG_0177 ABC polar amino acid family protein transporter, inner membrane subunit |
| MSMEG_2873 3-ketosteroid-delta4 (Uncharacterized protein) | MSMEG_0178 ATP-binding protein (Putative ABC transporter ATP-binding protein) (EC 3.6.3.21) |
| MSMEG_6680 Integral membrane protein (Uncharacterized protein) | MSMEG_1803 Putative anti-sigma regulatory factor, serine/threonine protein kinase (RsbW protein) |
| MSMEG_6681 Uncharacterized protein | MSMEG_2872 Short-chain dehydrogenase/reductase SDR |
| MSMEG_6210 Uncharacterized protein | MSMEG_4802 Conserved domain protein (Uncharacterized protein) |
| MSMEG_4798 L-carnitine dehydratase/bile acid-inducible protein F (EC 2.8.3.16) | MSMEG_1804 Alternate RNA polymerase sigma factor Sigf (RNA polymerase sigma-F factor) |
| MSMEG_4799 Aldehyde dehydrogenase (NAD) family protein (EC 1.2.1.-) | MSMEG_4800 3-oxoacyl-(Acyl-carrier-protein) reductase, putative (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.100) |
| MSMEG_5078 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) (ADP-glucose pyrophosphorylase) (ADP-glucose synthase) | MSMEG_4801 Carveol dehydrogenase (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.275) |
KO_stationary.phase_rep1
WT.vs..DglnR.N_starvation_rep2
WT.vs..DamtR.without.N_rep1
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
WT.vs..DamtR.without.N_rep2
X4XR.rep1
Biological.replicate.1.of.6..negative.control
dosR.WT_Replicate2
Biological.replicate.2.of.6..kanamycin.treatment
KO_log.phase_rep1
DglnR_without.vs..with.N_rep1
Wild.type.rep1.x
Biological.replicate.7.of.7..falcarinol.treatment
DglnR_without.vs..with.N_rep2
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.6..kanamycin.treatment
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X3dbfcy5plogcy3slide601norm
Sub.MIC.INH
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
Wild.type.rep2.y
Biological.replicate.1.of.6..kanamycin.treatment
X3dbfcy3plogcy5slide607norm
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
Biological.replicate.2.of.6..isoniazid.treatment
X4dbfcy5plogcy3slide480norm
stphcy5plogcy3slide580norm
WT_log.phase_rep2
WT.with.vs..without.N_dye.swap_rep1
stphcy3plogcy5slide581norm
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.2.of.6..negative.control
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.5
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Biological.replicate.7.of.7..panaxydol.treatment
Biological.replicate.5.of.6..negative.control
X3dbfcy5plogcy3slide603norm
Biological.replicate.5.of.6..kanamycin.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
WT.with.vs..without.N_rep2
Biological.replicate.1.of.7..panaxydol.treatment
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep1
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Biological.replicate.3.of.6..negative.control
X4dbfcy3plogcy5slide903norm
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.120min
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