Module 374 Residual: 0.50
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.50 | 1.7e-22 | 0.000000000036 | 88 | 16 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 1.7e-22 | |
| Motif 2 |
 |
| e-value: 0.000000000036 |
| MSMEG_6129 Uncharacterized protein | MSMEG_6125 Transcriptional regulator, LysR family (Transcriptional regulatory protein) |
| MSMEG_2388 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (Isopropylmalate isomerase) | MSMEG_2386 Transcriptional regulator (Bacterial regulatory proteins, IclR family) (Transcriptional regulator, IclR family protein) |
| MSMEG_2387 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (Isopropylmalate isomerase) | MSMEG_5413 Exopolyphosphatase (Ppx/GppA phosphatase) (EC 3.6.1.11) |
| MSMEG_0854 Two-component system sensor kinase | MSMEG_6837 Haloalkane dehalogenase (EC 3.8.1.5) |
| MSMEG_0856 DNA-binding response regulator, LuxR family protein (Two component transcriptional regulator, LuxR family) | MSMEG_5276 Enoyl-CoA hydratase (Enoyl-CoA hydratase EchA9) (EC 4.2.1.17) |
| MSMEG_6127 Anti-sigma factor antagonist | MSMEG_5277 Enoyl-CoA hydratase/isomerase (Probable enoyl-CoA hydratase) (EC 4.2.1.17) |
| MSMEG_0853 Uncharacterized protein | MSMEG_5414 Septum formation initiator subfamily protein, putative |
| MSMEG_6839 AraC-family transcriptional regulator (Transcriptional regulator, AraC family protein) | MSMEG_5275 Conserved transmembrane protein (Permease of the major facilitator superfamily protein) |
Biological.replicate.4.of.7..ethambutol.treatment
Wild.type.rep2.y
MB100pruR.vs..MB100.rep.2
MB100pruR.vs..MB100.rep.1
dcpA.knockout.rep2
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..panaxydol.treatment
WT.vs..DamtR.N.surplus_rep2
WT.vs..DamtR.N.surplus_rep1
stphcy5plogcy3slide487norm
X3dbfcy5plogcy3slide601norm
X3dbfcy3plogcy5slide607norm
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.4.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.120min
WT.vs..DamtR.without.N_rep2
Biological.replicate.4.of.6..negative.control
dosR.WT_Replicate3
dosR.WT_Replicate2
dosR.WT_Replicate1
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.2.of.7..falcarinol.treatment
Biological.replicate.1.of.7..panaxydol.treatment
WT_log.phase_rep2
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
WT.vs..DglnR.N_starvation_dye.swap_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.7.of.7..panaxydol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
X2XR.rep1
X2XR.rep2
Sub.MIC.INH
X4dbfcy3plogcy5slide903norm
Bedaquiline.vs..DMSO.15min
Biological.replicate.4.of.6..kanamycin.treatment
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.7.of.7..falcarinol.treatment
DglnR_without.vs..with.N_rep2
Biological.replicate.6.of.7..falcarinol.treatment
M..smegmatis.Acid.NO.treated
Biological.replicate.3.of.6..isoniazid.treatment
Biological.replicate.5.of.6..kanamycin.treatment
WT_stationary.phase_rep1
Biological.replicate.2.of.6..isoniazid.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
Plogcy5plogcy3slide113norm
Biological.replicate.2.of.6..negative.control
KO_log.phase_rep2
KO_log.phase_rep1
WT.vs..DamtR.without.N_.dyeswap_rep1
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Wild.type.rep3
Biological.replicate.4.of.6..isoniazid.treatment
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
mc2155.vs.Dcrp1.replicate.2
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.2.of.7..ethambutol.treatment
mc2155.vs.Dcrp1.replicate.4
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
Plogcy5plogcy3slide111norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
Slow.vs..Fast.Replicate.4
Biological.replicate.5.of.6..isoniazid.treatment
X3dbfcy5plogcy3slide603norm
Biological.replicate.5.of.7..falcarinol.treatment
DglnR_without.vs..with.N_dyeswap_rep2
Biological.replicate.1.of.6..negative.control
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate1
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