Module 378 Residual: 0.60
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.60 | 1100 | 32000 | 72 | 21 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 1100 | |
| Motif 2 |
 |
| e-value: 32000 |
| MSMEG_0491 Transcriptional regulator, LacI family (Transcriptional regulator, LacI family protein) | MSMEG_2775 Na(+)/H(+) antiporter NhaA (Sodium/proton antiporter NhaA) |
| MSMEG_0945 Conserved domain protein | MSMEG_3494 Putative secreted protein |
| MSMEG_4474 Acyl-CoA oxidase (EC 1.3.3.6) | MSMEG_5611 Heat shock protein Hsp20 (Spore protein) |
| MSMEG_5443 Dehydrogenase (FAD-dependent pyridine nucleotide-disulfide oxidoreductase) | MSMEG_3500 UPF0246 protein (Uncharacterized protein) |
| MSMEG_0462 Conserved membrane protein MmpS5_1 (MmpS4 protein) | MSMEG_0728 Uncharacterized protein |
| MSMEG_2955 Uncharacterized protein | MSMEG_3498 Uncharacterized protein |
| MSMEG_4021 Uncharacterized protein | MSMEG_4267 Cytochrome c oxidase polypeptide 4 (EC 1.9.3.1) (Cytochrome aa3 subunit 4) (Cytochrome c oxidase polypeptide IV) |
| MSMEG_0592 LacI-family transcriptional regulator (EC 5.1.1.1) (Putative rhamnose catabolism operon transcriptional regulator) | MSMEG_4097 Acyl-CoA dehydrogenase (EC 1.3.8.-) (Acyl-CoA dehydrogenase domain protein) |
| MSMEG_2991 Permease of the major facilitator superfamily protein | MSMEG_4022 TetR-family protein transcriptional regulator (Transcriptional regulatory repressor protein (Tetr-family) Ethr) |
| MSMEG_4269 Asparagine synthase (Glutamine-hydrolyzing) (EC 6.3.5.4) (Asparagine synthetase AsnB) | MSMEG_2120 Tetratricopeptide repeat family protein (Transcriptional regulator, LuxR family) |
| MSMEG_5444 RNA polymerase ECF-subfamily sigma factor (RNA polymerase sigma-70 factor, TIGR02957 family protein) |
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.4.of.6..negative.control
Bedaquiline.vs..DMSO.15min
Mycobacterium.smegmatis.Spheroplast.induced
dosR.WT_Replicate4
Biological.replicate.4.of.7..ethambutol.treatment
Plogcy5plogcy3slide113norm
dosR.WT_Replicate1
Wild.type.rep2.y
Plogcy5plogcy3slide110norm
DglnR_without.vs..with.N_rep1
MB100pruR.vs..MB100.rep.4
DamtR.with.vs..DamtR.without.N_.rep2
DglnR_without.vs..with.N_rep2
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.3.of.6..kanamycin.treatment
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.6.of.7..panaxydol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
WT.vs..DamtR.without.N_.dyeswap_rep1
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
mc2155.vs.Dcrp1.replicate.2
stphcy5plogcy3slide487norm
Biological.replicate.5.of.6..kanamycin.treatment
Biological.replicate.2.of.7..ethambutol.treatment
mc2155.vs.Dcrp1.replicate.4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
Biological.replicate.2.of.7..falcarinol.treatment
Plogcy5plogcy3slide111norm
X3dbfcy5plogcy3slide601norm
X3dbfcy3plogcy5slide607norm
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
WT.with.vs..without.N_dye.swap_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.5.of.7..ethambutol.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
Biological.replicate.7.of.7..panaxydol.treatment
dosR.WT_Replicate3
X3dbfcy5plogcy3slide603norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.with.vs..without.N_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DamtR.N.surplus_dyeswap_rep2
DglnR_without.vs..with.N_dyeswap_rep2
Biological.replicate.1.of.6..negative.control
DglnR_without.vs..with.N_dyeswap_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
X4dbfcy3plogcy5slide903norm
Bedaquiline.vs..DMSO.120min
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