Module 389 Residual: 0.49
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.49 | 0.61 | 5.6 | 81 | 17 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.61 | |
| Motif 2 |
 |
| e-value: 5.6 |
| MSMEG_5392 Potassium-transporting ATPase potassium-binding subunit (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) (Potassium-translocating ATPase A chain) | MSMEG_4308 5'-nucleotidase (EC 3.1.3.5) (HAD-superfamily hydrolase, subfamily IA, variant 1) (EC 3.1.3.18) |
| MSMEG_5396 KDP operon transcriptional regulatory protein KdpE (Two-component response regulator, KdpE) | MSMEG_5395 Sensor protein KdpD (EC 2.7.13.3) |
| MSMEG_0994 DNA-binding response regulator ResD (Two component transcriptional regulator, winged helix family) (EC 3.1.1.61) | MSMEG_5394 Potassium-transporting ATPase KdpC subunit (ATP phosphohydrolase [potassium-transporting] C chain) (Potassium-binding and translocating subunit C) (Potassium-translocating ATPase C chain) |
| MSMEG_0995 Glycosyl transferase family 2 (Glycosyl transferase, family protein 2) | MSMEG_4307 GTP cyclohydrolase 1 type 2 homolog |
| MSMEG_0996 Uncharacterized protein | MSMEG_4306 Uncharacterized protein |
| MSMEG_0997 Methyltransferase type 12 (Uncharacterized protein) | MSMEG_5391 Uncharacterized protein |
| MSMEG_0993 Histidine kinase (Integral membrane sensor signal transduction histidine kinase) (EC 2.7.13.3) | MSMEG_5393 Potassium-transporting ATPase ATP-binding subunit (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] B chain) (Potassium-binding and translocating subunit B) (Potassium-translocating ATPase B chain) |
| MSMEG_4305 Phosphoglycerate mutase (Putative bifunctional ribonuclease H/phosphoglycerate mutase) (EC 3.1.26.4) | MSMEG_4311 Conserved transmembrane protein (Uncharacterized protein) |
| MSMEG_4309 Low molecular weight protein-tyrosine-phosphatase (EC 3.1.3.48) (Phosphotyrosine protein phosphatase PtpA) |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
KO_log.phase_rep1
Biological.replicate.3.of.6..kanamycin.treatment
dcpA.knockout.rep2
Biological.replicate.4.of.6..negative.control
Wild.type.rep2.x
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.1.of.6..negative.control
Wild.type.rep3
dosR.WT_Replicate2
dosR.WT_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
Wild.type.rep2.y
Plogcy5plogcy3slide110norm
Wild.type.rep1.x
Wild.type.rep1.y
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.15min
Biological.replicate.2.of.7..panaxydol.treatment
DamtR.with.vs..DamtR.without.N_.rep2
Biological.replicate.5.of.6..kanamycin.treatment
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
Biological.replicate.6.of.7..ethambutol.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.5.of.7..panaxydol.treatment
Sub.MIC.INH
Biological.replicate.2.of.7..falcarinol.treatment
X3dbfcy5plogcy3slide601norm
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
Biological.replicate.2.of.7..ethambutol.treatment
WT.with.vs..without.N_dye.swap_rep1
X2.5..vs..50..air.saturation.Replicate.1
WT.with.vs..without.N_dye.swap_rep2
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
mc2155.vs.Dcrp1.replicate.3
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Bedaquiline.vs..DMSO.60min
Biological.replicate.5.of.6..isoniazid.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
Biological.replicate.5.of.6..negative.control
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
X4dbfcy5plogcy3slide901norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
WT.vs..DglnR.N_starvation_rep2
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep1
X2XR.rep2
WT.vs..DglnR.N_starvation_dye.swap_rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
X4dbfcy3plogcy5slide903norm
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