Module 390 Residual: 0.54
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.54 | 0.0000000002 | 0.00037 | 76 | 33 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000000002 | |
| Motif 2 |
 |
| e-value: 0.00037 |
| MSMEG_3359 Cis-3-chloroacrylic acid dehalogenase, putative | MSMEG_5153 Conserved hypothetical ala-, pro-rich protein (Uncharacterized protein) |
| MSMEG_5773 Acyl-acyl-carrier protein desaturase DesA1 (EC 1.14.19.2) (Fatty acid desaturase) | MSMEG_4202 Uncharacterized protein |
| MSMEG_5771 Uncharacterized protein | MSMEG_2148 HNH endonuclease domain protein |
| MSMEG_3407 Epoxide hydrolase | MSMEG_4414 Uncharacterized protein |
| MSMEG_5466 Oxidoreductase (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.-) | MSMEG_6107 Limonene 1,2-monooxygenase (EC 1.14.-.-) |
| MSMEG_3350 TRAP dicarboxylate transporter, DctM subunit (TRAP transporter, DctM-like membrane protein) | MSMEG_6106 Epoxide hydrolase (Epoxide hydrolase EphA) (EC 3.3.2.-) |
| MSMEG_6658 Alpha/beta hydrolase (Alpha/beta hydrolase fold) | MSMEG_6109 Lipoprotein lpqG (LpqG protein) |
| MSMEG_2794 GntR family transcriptional regulator (EC 3.6.3.14) (Transcriptional regulator, GntR family protein) | MSMEG_6108 Alcohol dehydrogenase GroES-like protein (Zinc-binding dehydrogenase) |
| MSMEG_2795 Transmembrane transport protein | MSMEG_2880 Enoyl-CoA hydratase (Enoyl-CoA hydratase/isomerase) (EC 4.2.1.17) |
| MSMEG_4203 Peptidase S8 and S53, subtilisin, kexin, sedolisin | MSMEG_3349 Trap dicarboxylate transporter, dctq subunit, putative (TrapT family, DctQ subunit, C4-dicarboxylate transport) |
| MSMEG_1573 Carbohydrate kinase family protein (Carbohydrate kinase, YjeF related protein) | MSMEG_0523 DNA-binding protein (Transcriptional regulator, XRE family) |
| MSMEG_1452 Sulfatase-modifying factor 1 | MSMEG_6244 TetR-family protein transcriptional regulator (TetR-family transcriptional regulator) |
| MSMEG_6315 Lipoprotein LpqH (Uncharacterized protein) | MSMEG_2879 Acyl-CoA dehydrogenase |
| MSMEG_1685 Uncharacterized protein | MSMEG_2878 Acyl-CoA dehydrogenase (Putative acyl-CoA dehydrogenase) |
| MSMEG_1451 Arylsulfatase | MSMEG_6828 Transcriptional regulator (Uncharacterized protein) |
| MSMEG_6313 Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase) | MSMEG_2874 Uncharacterized protein |
| MSMEG_2619 Efflux protein (Integral membrane efflux protein EfpA) |
KO_stationary.phase_rep1
Biological.replicate.5.of.7..falcarinol.treatment
Wild.type.rep2.y
X4XR.rep1
Bedaquiline.vs..DMSO.15min
Wild.type.rep2.x
MB100pruR.vs..MB100..rep.3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
dosR.WT_Replicate1
KO_log.phase_rep1
Plogcy5plogcy3slide110norm
Wild.type.rep1.x
Biological.replicate.7.of.7..falcarinol.treatment
DglnR_without.vs..with.N_rep2
Biological.replicate.3.of.7..panaxydol.treatment
MB100pruR.vs..MB100.rep.2
Biological.replicate.2.of.7..panaxydol.treatment
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.3.of.6..kanamycin.treatment
Biological.replicate.1.of.7..ethambutol.treatment
rel.knockout.rep2
rel.knockout.rep1
Biological.replicate.6.of.7..falcarinol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.4.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
WT_log.phase_rep2
X0.6..vs..50..air.saturation.Replicate.3
Sub.MIC.INH
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.vs..DamtR.N.surplus_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.1.of.6..kanamycin.treatment
X3dbfcy3plogcy5slide607norm
Biological.replicate.5.of.7..panaxydol.treatment
Biological.replicate.2.of.6..isoniazid.treatment
X4dbfcy5plogcy3slide480norm
X3dbfcy5plogcy3slide601norm
stphcy3plogcy5slide581norm
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
X2.5..vs..50..air.saturation.Replicate.3
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X3dbfcy5plogcy3slide603norm
Biological.replicate.5.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep1
X2XR.rep2
Biological.replicate.1.of.7..panaxydol.treatment
Wild.type.rep1.y
WT.vs..DglnR.N_starvation_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
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