Module 395 Residual: 0.54
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.54 | 2.8e-19 | 0.00089 | 81 | 22 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 2.8e-19 | |
| Motif 2 |
 |
| e-value: 0.00089 |
| MSMEG_3053 DNA-directed RNA polymerase subunit omega (RNAP omega subunit) (EC 2.7.7.6) (RNA polymerase omega subunit) (Transcriptase subunit omega) | MSMEG_2365 Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) (EC 6.3.5.7) |
| MSMEG_3054 Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase) (EC 4.1.1.36) | MSMEG_2364 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (Asp/Glu-ADT subunit C) (EC 6.3.5.-) |
| MSMEG_3010 Acetyl-hydrolase (EC 3.1.1.-) (Caprolactone hydrolase) (EC 3.1.1.6) | MSMEG_2608 Cobalt transport protein CbiM (Uncharacterized protein) |
| MSMEG_6938 ParB-like partition proteins (Putative chromosome-partitioning protein parB) | MSMEG_2609 Cobalt ABC transporter CbiQ, permease subunit (Cobalt ABC transporter, permease protein CbiQ) |
| MSMEG_5155 Nitroreductase (EC 1.6.99.3) | MSMEG_1353 ABC1 family protein (Bbc-1) |
| MSMEG_5154 Uncharacterized protein | MSMEG_1352 Hydrolase, alpha/beta fold family protein (Lipase/esterase lipG) |
| MSMEG_4362 Universal stress protein family protein (UspA) | MSMEG_6585 Acyl-CoA dehydrogenase |
| MSMEG_3009 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase (EC 1.1.1.-) | MSMEG_6584 Acyl-CoA dehydrogenase |
| MSMEG_0859 Transcriptional regulator, TetR family (Transcriptional regulator, TetR family protein) | MSMEG_3817 Uncharacterized protein |
| MSMEG_0857 Uncharacterized protein | MSMEG_2607 Cobalamin (Vitamin B12) biosynthesis CbiM protein (Cobalamin biosynthesis protein CbiM) |
| MSMEG_2610 Cobalt ABC transporter, ATPase subunit (Cobalt transport protein ATP-binding subunit) | MSMEG_6582 FAD-dependent pyridine nucleotide-disulfide oxidoreductase (Pyridine nucleotide-disulphide oxidoreductase domain protein) |
KO_stationary.phase_rep1
Bedaquiline.vs..DMSO.30min
Wild.type.rep2.y
dcpA.knockout.rep2
M..smegmatis.Acid.NO.treated
X4XR.rep1
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.1.of.6..negative.control
dosR.WT_Replicate3
KO_log.phase_rep2
KO_log.phase_rep1
dosR.WT_Replicate4
DglnR_without.vs..with.N_rep1
DglnR_without.vs..with.N_rep2
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.7.of.7..ethambutol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
rel.knockout.rep2
rel.knockout.rep1
Biological.replicate.1.of.7..falcarinol.treatment
MB100pruR.vs..MB100.rep.2
Bedaquiline.vs..DMSO.15min
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.1
WT_log.phase_rep2
X0.6..vs..50..air.saturation.Replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.vs..DamtR.N.surplus_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
mc2155.vs.Dcrp1.replicate.2
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
Biological.replicate.5.of.7..panaxydol.treatment
Sub.MIC.INH
Biological.replicate.2.of.7..falcarinol.treatment
Plogcy5plogcy3slide111norm
Biological.replicate.5.of.6..negative.control
X3dbfcy5plogcy3slide601norm
X2.5..vs..50..air.saturation.Replicate.5
Biological.replicate.2.of.7..ethambutol.treatment
WT.with.vs..without.N_dye.swap_rep1
stphcy5plogcy3slide487norm
X2.5..vs..50..air.saturation.Replicate.2
Biological.replicate.2.of.7..panaxydol.treatment
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
Biological.replicate.5.of.7..ethambutol.treatment
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Bedaquiline.vs..DMSO.60min
Biological.replicate.4.of.7..falcarinol.treatment
Biological.replicate.5.of.6..isoniazid.treatment
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
Wild.type.rep3
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.vs..DglnR.N_starvation_rep1
WT.with.vs..without.N_rep1
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.4.of.7..ethambutol.treatment
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
X4dbfcy3plogcy5slide903norm
Bedaquiline.vs..DMSO.120min
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