Module 405 Residual: 0.55
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Residual Motif 1 e-value Motif 2 e-value Conditions Genes version
0.55 2.7e-17 0.00000000000017 77 36 20160204
Motif 1
e-value: 2.7e-17
e-value: 0.00000000000017
MSMEG_3132 DNA-binding protein (Transcriptional regulator, XRE family) MSMEG_5298 Uncharacterized protein
MSMEG_0510 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit (EC 4.1.2.40) MSMEG_6496 ABC transporter related protein (EC 3.6.3.36) (Nitrate/sulfonate/bicarbonate ABC transporter ATPase subunit)
MSMEG_3507 Fructose-bisphosphate aldolase (Fructose-bisphosphate aldolase class-I) (EC 4.1.2.13) MSMEG_3418 Uncharacterized protein
MSMEG_0512 BadF/BadG/BcrA/BcrD ATPase family protein MSMEG_5497 Uncharacterized protein
MSMEG_3227 Pyruvate kinase (EC 2.7.1.40) MSMEG_2513 Uncharacterized protein
MSMEG_5634 Uncharacterized protein MSMEG_6741 Antar domain protein
MSMEG_2556 Beta-glucosidase (EC 3.2.1.21) (Glycoside hydrolase family 3 domain protein) (EC 3.2.1.21) MSMEG_4383 Conserved transmembrane transport protein MmpL1 (MmpL5 protein)
MSMEG_2552 Aldehyde dehydrogenase (NAD) family protein (EC 1.2.1.-) (Putative aldehyde dehydrogenase) (EC 1.2.1.3) MSMEG_1077 Uncharacterized protein
MSMEG_4685 Oxidoreductase MSMEG_5549 Uncharacterized protein
MSMEG_2162 MmcJ protein MSMEG_4691 HNH nuclease
MSMEG_0706 4-carboxy-4-hydroxy-2-oxoadipate aldolase (4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase) (EC 4.1.-.-) MSMEG_0511 Putative sugar isomerase, AgaS family protein (Putative tagatose-6-phosphate ketose/aldose isomerase)
MSMEG_0702 Luciferase-like monooxygenase superfamily (EC 1.14.14.5) (Monooxygenase) MSMEG_0441 Uncharacterized protein
MSMEG_0590 Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase (EC 1.1.1.1) (EC 4.1.2.19) MSMEG_0446 Amino acid permease-associated region (Putrescine importer)
MSMEG_0214 L-sorbosone dehydrogenase (SMP-30/Gluconolaconase/LRE-like region) MSMEG_6229 Glycerol kinase (EC 2.7.1.30)
MSMEG_6310 4-hydroxybutyrate coenzyme A transferase (EC 2.8.3.-) MSMEG_0589 L-rhamnose isomerase (EC 5.3.1.-) (EC 5.3.1.14)
MSMEG_0708 LysR family regulatory protein (Transcriptional regulator, LysR family protein) MSMEG_0445 Amidohydrolase family protein (Uncharacterized protein)
MSMEG_0509 DeoR-family transcriptional regulator (Transcriptional regulatory protein) MSMEG_0588 Major facilitator superfamily (MFS) family inositol transporter (Putative rhamnose tranport protein, MFS family protein)
MSMEG_0492 Conserved hypothetical integral membrane protein (Uncharacterized protein) MSMEG_4158 Putative transposase (Uncharacterized protein)
KO_stationary.phase_rep1
KO_stationary.phase_rep2
WT.vs..DamtR.without.N_rep1
Biological.replicate.2.of.7..panaxydol.treatment
WT.vs..DamtR.without.N_rep2
Mycobacterium.smegmatis.Spheroplast.induced
Biological.replicate.1.of.6..negative.control
Wild.type.rep3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Biological.replicate.4.of.6..kanamycin.treatment
Wild.type.rep2.y
Wild.type.rep2.x
Wild.type.rep1.x
Wild.type.rep1.y
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep1
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.6..isoniazid.treatment
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.7..falcarinol.treatment
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.6.of.7..falcarinol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
X3dbfcy5plogcy3slide601norm
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.5
Slow.vs..Fast.Replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
Plogcy5plogcy3slide113norm
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
Biological.replicate.3.of.6..negative.control
dcpA.knockout.rep1
Biological.replicate.2.of.7..falcarinol.treatment
Plogcy5plogcy3slide111norm
X2.5..vs..50..air.saturation.Replicate.4
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
Biological.replicate.2.of.6..negative.control
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
Bedaquiline.vs..DMSO.60min
Biological.replicate.4.of.7..falcarinol.treatment
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.3.of.6..kanamycin.treatment
Biological.replicate.5.of.6..negative.control
Biological.replicate.5.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DamtR.N.surplus_dyeswap_rep2
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep1
X2XR.rep2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Sub.MIC.INH
BatchCulture_LBTbroth_StationaryPhase_Replicate2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.120min
Log in to post comments