Module 406 Residual: 0.54
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.54 | 2.2e-17 | 0.0000000000028 | 87 | 22 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 2.2e-17 | |
| Motif 2 |
 |
| e-value: 0.0000000000028 |
| MSMEG_6610 Uncharacterized protein | MSMEG_2190 Acyl-CoA dehydrogenase (EC 1.3.8.1) (Acyl-CoA dehydrogenase domain protein) |
| MSMEG_6612 ATPase, MoxR family protein | MSMEG_2191 Acyl-CoA dehydrogenase (EC 1.3.-.-) (Acyl-CoA dehydrogenase family protein) (EC 1.3.99.-) |
| MSMEG_0159 Formate dehydrogenase, gamma subunit (EC 1.2.1.2) | MSMEG_3431 Choline dehydrogenase (EC 1.1.99.1) (Glucose-methanol-choline oxidoreductase) (EC 1.1.99.1) |
| MSMEG_1761 Integral membrane protein | MSMEG_1758 Uncharacterized protein |
| MSMEG_0075 Putative alanine and proline rich protein (Uncharacterized protein) | MSMEG_1220 ABC-type transport system permease protein I (Branched-chain amino acid ABC-type transport system) |
| MSMEG_1218 ABC-type transport system ATP-binding protein II (Branched-chain amino acid ABC transporter ATP-binding protein) | MSMEG_0161 Formate dehydrogenase, alpha subunit (EC 1.2.1.2) |
| MSMEG_0160 Formate dehydrogenase beta subunit (EC 1.-.-.-) (Formate dehydrogenase, beta subunit) (EC 1.2.1.2) | MSMEG_1219 ABC-type transport system permease protein II (Inner-membrane translocator) |
| MSMEG_2824 | MSMEG_0162 NAD-dependent formate dehydrogenase delta subunit (EC 1.2.1.2) |
| MSMEG_6609 Uncharacterized protein | MSMEG_6808 Uncharacterized protein |
| MSMEG_6807 Transcriptional regulator, TetR family (Transcriptional regulator, TetR family protein) | MSMEG_6809 ATPase associated with various cellular activities AAA_5 (EC 1.7.2.5) (CbbQ protein) |
| MSMEG_2192 Uncharacterized protein | MSMEG_1217 ABC-type transport system ATP-binding protein I (Branched-chain amino acid ABC transporter ATP-binding protein) |
KO_stationary.phase_rep2
Biological.replicate.4.of.6..isoniazid.treatment
Wild.type.rep2.x
MB100pruR.vs..MB100.rep.4
Biological.replicate.5.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO..45min
Biological.replicate.6.of.7..panaxydol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
DamtR.with.vs..DamtR.without.N_.rep2
stphcy5plogcy3slide487norm
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.6.of.7..ethambutol.treatment
X4dbfcy5plogcy3slide901norm
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DamtR.without.N_rep2
Biological.replicate.4.of.6..negative.control
Plogcy5plogcy3slide110norm
dosR.WT_Replicate3
dosR.WT_Replicate2
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.2.of.7..falcarinol.treatment
Biological.replicate.1.of.7..panaxydol.treatment
Biological.replicate.3.of.6..negative.control
WT_log.phase_rep2
WT_log.phase_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
Biological.replicate.6.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
WT.vs..DglnR.N_starvation_dye.swap_rep1
Biological.replicate.7.of.7..panaxydol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
WT.vs..DglnR.N_starvation_rep1
Biological.replicate.1.of.7..falcarinol.treatment
X2XR.rep1
X2XR.rep2
X4dbfcy3plogcy5slide903norm
rel.knockout.rep2
MB100pruR.vs..MB100..rep.3
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.7.of.7..falcarinol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.6..kanamycin.treatment
rel.knockout.rep1
Biological.replicate.6.of.7..falcarinol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
WT_stationary.phase_rep1
Biological.replicate.2.of.6..isoniazid.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Bedaquiline.vs..DMSO.30min
WT.vs..DamtR.without.N_.dyeswap_rep1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
BatchCulture_LBTbroth_StationaryPhase_Replicate4
X0.6..vs..50..air.saturation.Replicate.4
mc2155.vs.Dcrp1.replicate.3
BatchCulture_LBTbroth_StationaryPhase_Replicate3
dcpA.knockout.rep2
dcpA.knockout.rep1
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
X4XR.rep1
Slow.vs..Fast.Replicate.5
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
Biological.replicate.5.of.6..negative.control
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
Biological.replicate.1.of.6..negative.control
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
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