Module 407 Residual: 0.60
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.60 | 2e-18 | 0.000000016 | 77 | 30 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 2e-18 | |
| Motif 2 |
 |
| e-value: 0.000000016 |
| MSMEG_0621 ESAT-6-like protein EsxH | MSMEG_0624 Peptidase S8 and S53, subtilisin, kexin, sedolisin (Subtilase family protein) |
| MSMEG_3172 DNA polymerase IV (Pol IV) (EC 2.7.7.7) | MSMEG_1991 Acyl-CoA dehydrogenase FadE3 (EC 1.3.8.1) (Isovaleryl-CoA dehydrogenase) |
| MSMEG_1498 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) | MSMEG_3614 Uncharacterized protein |
| MSMEG_3170 Conserved domain protein (RNA-binding S4) | MSMEG_2542 Integral membrane protein DUF6 |
| MSMEG_1496 3-hydroxyisobutyrate dehydrogenase (HIBADH) (EC 1.1.1.31) | MSMEG_3613 Uncharacterized protein |
| MSMEG_1497 Acyl-CoA dehydrogenase (EC 1.3.99.-) (Acyl-CoA dehydrogenase family protein member 8) | MSMEG_0395 Uncharacterized protein |
| MSMEG_4070 Transcriptional regulator, TetR family protein, putative (Transcriptional regulatory protein) | MSMEG_5589 Divalent metal cation transporter MntH |
| MSMEG_5591 Uncharacterized protein | MSMEG_6666 Uncharacterized protein |
| MSMEG_6031 Putative short-chain type dehydrogenase/reductase MSMEG_6031/MSMEI_5872 (EC 1.1.1.-) | MSMEG_2544 Transcriptional regulator, LysR family (Transcriptional regulator, LysR family protein) |
| MSMEG_2532 Dehydroquinase dehydratase, type II (EC 4.2.1.10) | MSMEG_4067 Zinc-containing alcohol dehydrogenase superfamily (EC 1.6.5.5) (Zinc-containing alcohol dehydrogenase superfamily protein) |
| MSMEG_0622 ESX-3 secretion-associated protein EspG3 | MSMEG_6340 Short-chain dehydrogenase/reductase SDR (EC 1.1.1.100) |
| MSMEG_0623 ESX-3 secretion system protein EccD3 (ESX conserved component D3) (Type VII secretion system protein EccD3) (T7SS protein EccD3) | MSMEG_1500 TetR family protein transcriptional regulatory protein |
| MSMEG_0620 ESAT-6-like protein EsxG | MSMEG_0009 Uncharacterized protein |
| MSMEG_1499 FAD-binding monooxygenase (Oxygenase) | MSMEG_3911 Acyl-CoA dehydrogenase-like protein (Oxidoreductase) |
| MSMEG_0626 ESX-3 secretion system protein EccE3 (ESX conserved component E3) (Type VII secretion system protein EccE3) (T7SS protein EccE3) | MSMEG_2445 UPF0061 protein MSMEG_2445/MSMEI_2384 |
KO_stationary.phase_rep1
Bedaquiline.vs..DMSO.30min
Biological.replicate.5.of.7..falcarinol.treatment
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Bedaquiline.vs..DMSO.15min
Mycobacterium.smegmatis.Spheroplast.induced
dosR.WT_Replicate4
Biological.replicate.4.of.7..ethambutol.treatment
Wild.type.rep3
WT.with.vs..without.N_dye.swap_rep1
Biological.replicate.2.of.7..falcarinol.treatment
MB100pruR.vs..MB100..rep.3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
dosR.WT_Replicate1
KO_log.phase_rep2
KO_log.phase_rep1
Plogcy5plogcy3slide110norm
Wild.type.rep1.y
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.6..kanamycin.treatment
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.6.of.7..panaxydol.treatment
M..smegmatis.Acid.NO.treated
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Biological.replicate.4.of.6..kanamycin.treatment
X0.6..vs..50..air.saturation.Replicate.1
Biological.replicate.2.of.6..kanamycin.treatment
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.5
WT.vs..DamtR.N.surplus_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
mc2155.vs.Dcrp1.replicate.3
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.4.of.6..negative.control
mc2155.vs.Dcrp1.replicate.4
Biological.replicate.3.of.6..negative.control
dcpA.knockout.rep2
dcpA.knockout.rep1
WT.vs..DamtR.N.surplus_rep1
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
Biological.replicate.4.of.7..panaxydol.treatment
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
X4XR.rep1
Slow.vs..Fast.Replicate.4
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Bedaquiline.vs..DMSO.60min
WT.vs..DglnR.N_starvation_dye.swap_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.7.of.7..panaxydol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.1.of.7..falcarinol.treatment
X2XR.rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
Plogcy5plogcy3slide113norm
Biological.replicate.2.of.6..negative.control
Biological.replicate.5.of.6..kanamycin.treatment
X4dbfcy3plogcy5slide903norm
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