Module 423 Residual: 0.53
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.53 | 0.0012 | 0.0092 | 78 | 29 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0012 | |
| Motif 2 |
 |
| e-value: 0.0092 |
| MSMEG_4623 GTPase Obg (EC 3.6.5.-) (GTP-binding protein Obg) | MSMEG_0911 Isocitrate lyase (EC 4.1.3.1) |
| MSMEG_5779 Phosphate import ATP-binding protein PstB (EC 3.6.3.27) (ABC phosphate transporter) (Phosphate-transporting ATPase) | MSMEG_5413 Exopolyphosphatase (Ppx/GppA phosphatase) (EC 3.6.1.11) |
| MSMEG_4621 Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK) | MSMEG_0404 Sigma associated protein |
| MSMEG_4290 Glutamine synthetase 1 (EC 6.3.1.2) (Glutamate--ammonia ligase) | MSMEG_0405 Extra cytoplasmic sigma factor |
| MSMEG_0682 Uncharacterized protein | MSMEG_5782 Phosphate ABC transporter, phosphate-binding protein PstS |
| MSMEG_1281 Uncharacterized protein | MSMEG_1691 Transcriptional regulatory protein |
| MSMEG_1280 Hypothetical cytosolic protein (Uncharacterized protein) | MSMEG_1692 ECF-family protein RNA polymerase sigma factor (Putative ECF-family RNA polymerase sigma factor) (EC 2.7.7.6) |
| MSMEG_6288 Uncharacterized protein | MSMEG_5781 Phosphate ABC transporter, permease protein PstC (Phosphate-transport integral membrane ABC transporter PstC2) |
| MSMEG_1689 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100) (Short-chain dehydrogenase/reductase SDR) | MSMEG_4336 Uncharacterized protein |
| MSMEG_3803 19 kDa lipoprotein antigen LpqH-like protein (Lipoprotein LpqH) | MSMEG_3934 Phosphoenolpyruvate synthase (PEP synthase) (EC 2.7.9.2) (Pyruvate, water dikinase) |
| MSMEG_3806 Uncharacterized protein | MSMEG_2583 Putative transcriptional regulator |
| MSMEG_3804 Uncharacterized protein | MSMEG_2582 Uncharacterized protein |
| MSMEG_3292 DNA-binding protein (Transcriptional regulator, XRE family) | MSMEG_5780 Phosphate ABC transporter permease protein PstA1 (Phosphate ABC transporter, permease protein PstA) |
| MSMEG_3291 Uncharacterized protein | MSMEG_1279 Uncharacterized protein MSMEG_1279/MSMEI_1241 |
| MSMEG_4288 Integral membrane protein |
WT.vs..DamtR.without.N_rep1
KO_log.phase_rep1
Bedaquiline.vs..DMSO.15min
Biological.replicate.4.of.6..isoniazid.treatment
dosR.WT_Replicate4
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.1.of.6..negative.control
Wild.type.rep3
dosR.WT_Replicate1
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Wild.type.rep2.y
Wild.type.rep1.y
Wild.type.rep1.x
Biological.replicate.7.of.7..falcarinol.treatment
MB100pruR.vs..MB100.rep.4
DamtR.with.vs..DamtR.without.N_.rep2
Biological.replicate.6.of.6..negative.control
DglnR_without.vs..with.N_rep2
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..isoniazid.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep1
WT.vs..DamtR.N.surplus_.dyeswap_rep1
DglnR_without.vs..with.N_rep1
Biological.replicate.6.of.7..falcarinol.treatment
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Biological.replicate.3.of.6..isoniazid.treatment
WT.vs..DamtR.without.N_.dyeswap_rep1
X0.6..vs..50..air.saturation.Replicate.1
X3dbfcy5plogcy3slide601norm
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
stphcy5plogcy3slide487norm
Biological.replicate.7.of.7..panaxydol.treatment
Biological.replicate.1.of.7..panaxydol.treatment
dcpA.knockout.rep1
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
WT.with.vs..without.N_dye.swap_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.1.of.7..falcarinol.treatment
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
Tet.CarD.vs.Control..Replicates.1..2..and.3.
WT.with.vs..without.N_dye.swap_rep2
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
Biological.replicate.5.of.6..negative.control
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
Wild.type.rep2.x
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.with.vs..without.N_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_rep1
X2XR.rep1
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
Plogcy5plogcy3slide113norm
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
Bedaquiline.vs..DMSO..45min
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
Biological.replicate.6.of.7..panaxydol.treatment
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