Module 427 Residual: 0.47Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Summary

Residual	Motif 1 e-value	Motif 2 e-value	Conditions	Genes	version
0.47			70	7	20160204

Motifs

Motif 1

Motif 2

Module Plots

Members

MSMEG_6438 Uncharacterized protein

MSMEG_6432 Uncharacterized protein

Conditions

KO_stationary.phase_rep1

Bedaquiline.vs..DMSO.30min

Bedaquiline.vs..DMSO.15min

Mycobacterium.smegmatis.Spheroplast.induced

Wild.type.rep2.x

Biological.replicate.4.of.7..ethambutol.treatment

dosR.WT_Replicate3

dosR.WT_Replicate2

stphcy5plogcy3slide487norm

Biological.replicate.2.of.7..panaxydol.treatment

Wild.type.rep1.y

DglnR_without.vs..with.N_rep1

DglnR_without.vs..with.N_rep2

Biological.replicate.3.of.7..panaxydol.treatment

MB100pruR.vs..MB100.rep.2

WT.vs..DamtR.without.N_.dyeswap_rep1

WT.vs..DamtR.without.N_.dyeswap_rep2

MB100pruR.vs..MB100.rep.1

Bedaquiline.vs..DMSO.60min

Biological.replicate.6.of.6..kanamycin.treatment

rel.knockout.rep1

Bedaquiline.vs..DMSO..45min

Biological.replicate.6.of.6..negative.control

Biological.replicate.6.of.7..panaxydol.treatment

DamtR.with.vs..DamtR.without.N_.rep2

X0.6..vs..50..air.saturation.Replicate.3

Sub.MIC.INH

M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1

Biological.replicate.2.of.7..falcarinol.treatment

BatchCulture_LBTbroth_StationaryPhase_Replicate2

Biological.replicate.1.of.6..kanamycin.treatment

Biological.replicate.1.of.7..panaxydol.treatment

Biological.replicate.5.of.7..panaxydol.treatment

Biological.replicate.2.of.6..isoniazid.treatment

stphcy5plogcy3slide580norm

X2.5..vs..50..air.saturation.Replicate.4

Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.

X3dbfcy3plogcy5slide607norm

WT.with.vs..without.N_dye.swap_rep1

X2.5..vs..50..air.saturation.Replicate.2

X2.5..vs..50..air.saturation.Replicate.3

Biological.replicate.2.of.6..kanamycin.treatment

Biological.replicate.1.of.7..ethambutol.treatment

Biological.replicate.5.of.7..ethambutol.treatment

Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.

WT.with.vs..without.N_dye.swap_rep2

Biological.replicate.6.of.7..ethambutol.treatment

Biological.replicate.7.of.7..panaxydol.treatment

BatchCulture_LBTbroth_ExponentialPhase_Replicate2

BatchCulture_LBTbroth_ExponentialPhase_Replicate3

X4dbfcy5plogcy3slide480norm

mc2155.pMind..vs.mc2155.pMind.6189.replicate.3

X4dbfcy5plogcy3slide901norm

mc2155.pMind..vs.mc2155.pMind.6189.replicate.1

WT.with.vs..without.N_rep2

WT.with.vs..without.N_rep1

DglnR_without.vs..with.N_dyeswap_rep2

Biological.replicate.1.of.6..negative.control

DglnR_without.vs..with.N_dyeswap_rep1

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1

WT.vs..DglnR.N_starvation_rep1

BatchCulture_LBTbroth_StationaryPhase_Replicate4

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2

Plogcy5plogcy3slide113norm

BatchCulture_LBTbroth_StationaryPhase_Replicate3

BatchCulture_LBTbroth_StationaryPhase_Replicate1

M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3

M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1

X4dbfcy3plogcy5slide903norm

Bedaquiline.vs..DMSO.120min

Comments