Module 451 Residual: 0.38Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Summary

Residual	Motif 1 e-value	Motif 2 e-value	Conditions	Genes	version
0.38			76	7	20160204

Motifs

Motif 1

Motif 2

Module Plots

Members

MSMEG_2959 4-aminobutyrate aminotransferase (4-aminobutyrate transaminase) (EC 2.6.1.19)

Conditions

Wild.type.rep2.x

KO_stationary.phase_rep1

Bedaquiline.vs..DMSO.30min

WT.vs..DamtR.without.N_rep2

Mycobacterium.smegmatis.Spheroplast.induced

dosR.WT_Replicate4

X2XR.rep1

MB100pruR.vs..MB100..rep.3

dosR.WT_Replicate1

KO_log.phase_rep2

Wild.type.rep2.y

Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.

Wild.type.rep1.x

DglnR_without.vs..with.N_rep1

DglnR_without.vs..with.N_rep2

MB100pruR.vs..MB100.rep.2

WT.vs..DamtR.without.N_.dyeswap_rep1

WT.vs..DamtR.without.N_.dyeswap_rep2

MB100pruR.vs..MB100.rep.1

Biological.replicate.3.of.6..kanamycin.treatment

Biological.replicate.1.of.7..falcarinol.treatment

X4dbfcy5plogcy3slide480norm

DamtR.with.vs..DamtR.without.N_.rep1

DamtR.with.vs..DamtR.without.N_.rep2

X3dbfcy5plogcy3slide601norm

X0.6..vs..50..air.saturation.Replicate.3

X0.6..vs..50..air.saturation.Replicate.2

X0.6..vs..50..air.saturation.Replicate.5

X0.6..vs..50..air.saturation.Replicate.4

WT.vs..DamtR.N.surplus_rep1

mc2155.vs.Dcrp1.replicate.2

stphcy5plogcy3slide487norm

Biological.replicate.4.of.6..negative.control

WT.vs..DamtR.N.surplus_rep2

Sub.MIC.INH

Plogcy5plogcy3slide111norm

X2.5..vs..50..air.saturation.Replicate.4

WT_log.phase_rep1

WT.with.vs..without.N_dye.swap_rep1

X2.5..vs..50..air.saturation.Replicate.1

X2.5..vs..50..air.saturation.Replicate.2

X2.5..vs..50..air.saturation.Replicate.3

WT_stationary.phase_rep2

WT_stationary.phase_rep1

X4XR.rep2

DamtR.with.vs..DamtR.without.N_dyeswap_.rep1

X4XR.rep1

Slow.vs..Fast.Replicate.4

Slow.vs..Fast.Replicate.5

WT.with.vs..without.N_dye.swap_rep2

Slow.vs..Fast.Replicate.2

Slow.vs..Fast.Replicate.3

BatchCulture_LBTbroth_ExponentialPhase_Replicate3

X3dbfcy5plogcy3slide603norm

BatchCulture_LBTbroth_ExponentialPhase_Replicate1

mc2155.pMind..vs.mc2155.pMind.6189.replicate.2

mc2155.pMind..vs.mc2155.pMind.6189.replicate.3

BatchCulture_LBTbroth_ExponentialPhase_Replicate4

WT.vs..DamtR.N.surplus_.dyeswap_rep1

WT.with.vs..without.N_rep2

Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.

WT.vs..DamtR.N.surplus_dyeswap_rep2

DglnR_without.vs..with.N_dyeswap_rep2

Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.

X2XR.rep2

mc2155.pMind..vs.mc2155.pMind.6189.replicate.1

WT.vs..DglnR.N_starvation_dye.swap_rep2

BatchCulture_LBTbroth_StationaryPhase_Replicate4

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2

Plogcy5plogcy3slide113norm

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4

BatchCulture_LBTbroth_StationaryPhase_Replicate1

Biological.replicate.2.of.6..negative.control

Biological.replicate.3.of.6..negative.control

X4dbfcy3plogcy5slide903norm

Bedaquiline.vs..DMSO.120min

Comments