Module 473 Residual: 0.49
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Residual Motif 1 e-value Motif 2 e-value Conditions Genes version
0.49 0 86 21 20160204
Motif 1
e-value: 0
MSMEG_1259 Uncharacterized protein MSMEG_4938 ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
MSMEG_4942 ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6) MSMEG_4939 ATP synthase subunit b-delta [Includes: ATP synthase subunit b (ATP synthase F(0) sector subunit b 2) (ATPase subunit I 2) (F-type ATPase subunit b 2) (F-ATPase subunit b 2); ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)]
MSMEG_2340 Uncharacterized protein MSMEG_4936 ATP synthase subunit beta (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)
MSMEG_2827 Uncharacterized protein MSMEG_4937 ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
MSMEG_0803 Uncharacterized protein MSMEG_4941 ATP synthase subunit c
MSMEG_4789 Uncharacterized protein MSMEG_4940 ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
MSMEG_4404 Uncharacterized protein MSMEG_0396 Uncharacterized protein
MSMEG_6461 Uncharacterized protein MSMEG_4933 Uncharacterized protein
MSMEG_4943 Uncharacterized protein MSMEG_3698 Uncharacterized protein
MSMEG_6696 Uncharacterized protein MSMEG_4944 Uncharacterized protein
MSMEG_5377 Uncharacterized protein
KO_stationary.phase_rep1
Biological.replicate.4.of.7..ethambutol.treatment
Wild.type.rep2.y
Wild.type.rep2.x
MB100pruR.vs..MB100.rep.2
MB100pruR.vs..MB100.rep.1
Bedaquiline.vs..DMSO..45min
Biological.replicate.6.of.7..panaxydol.treatment
WT.vs..DamtR.N.surplus_rep1
X3dbfcy5plogcy3slide601norm
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Biological.replicate.4.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.120min
WT.vs..DamtR.without.N_rep1
WT.vs..DamtR.without.N_rep2
dosR.WT_Replicate2
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.7..panaxydol.treatment
WT_log.phase_rep1
WT.with.vs..without.N_dye.swap_rep1
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.5.of.7..ethambutol.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
rel.knockout.rep2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
WT.vs..DglnR.N_starvation_rep1
WT.vs..DglnR.N_starvation_rep2
X2XR.rep1
Sub.MIC.INH
X4dbfcy3plogcy5slide903norm
Bedaquiline.vs..DMSO.15min
DglnR_without.vs..with.N_rep1
DglnR_without.vs..with.N_rep2
Biological.replicate.3.of.6..kanamycin.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
WT_stationary.phase_rep2
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
Plogcy5plogcy3slide113norm
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Wild.type.rep1.x
Wild.type.rep1.y
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.3.of.7..falcarinol.treatment
Wild.type.rep3
BatchCulture_LBTbroth_StationaryPhase_Replicate4
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
mc2155.vs.Dcrp1.replicate.2
mc2155.vs.Dcrp1.replicate.1
mc2155.vs.Dcrp1.replicate.4
BatchCulture_LBTbroth_StationaryPhase_Replicate3
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
Plogcy5plogcy3slide111norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
X4XR.rep2
Slow.vs..Fast.Replicate.4
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
BatchCulture_LBTbroth_StationaryPhase_Replicate1
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