Module 475 Residual: 0.46
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.46 | 4.1 | 15 | 86 | 13 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 4.1 | |
| Motif 2 |
 |
| e-value: 15 |
| MSMEG_5999 Short chain dehydrogenase (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.100) | MSMEG_6001 Enoyl-CoA hydratase (Enoyl-CoA hydratase/isomerase) (EC 4.2.1.17) |
| MSMEG_2054 NADH dehydrogenase subunit j (NADH-ubiquinone/plastoquinone oxidoreductase chain 6) (EC 1.6.5.3) | MSMEG_6002 Coenzyme A transferase, subunit A (Putative coa-transferase (Alpha subunit)) (EC 2.8.3.12) |
| MSMEG_2062 NADH-quinone oxidoreductase subunit B (EC 1.6.5.11) (NADH dehydrogenase I subunit B) (NDH-1 subunit B) | MSMEG_6003 Coenzyme A transferase, subunit B |
| MSMEG_2063 NADH-quinone oxidoreductase subunit A (EC 1.6.5.11) (NADH dehydrogenase I subunit A) (NDH-1 subunit A) (NUO1) | MSMEG_6004 2-nitropropane dioxygenase NPD (EC 1.13.12.16) (Oxidoreductase, 2-nitropropane dioxygenase family protein) |
| MSMEG_6000 Short chain dehydrogenase (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.100) | MSMEG_2052 NADH-quinone oxidoreductase chain l (NADH-quinone oxidoreductase, L subunit) (EC 1.6.99.5) |
| MSMEG_2059 NADH-quinone oxidoreductase chain e (EC 1.6.99.5) | MSMEG_2050 NADH-quinone oxidoreductase subunit N (EC 1.6.5.11) (NADH dehydrogenase I subunit N) (NDH-1 subunit N) |
| MSMEG_2057 NADH-quinone oxidoreductase (EC 1.6.5.11) |
KO_stationary.phase_rep1
Biological.replicate.4.of.6..isoniazid.treatment
MB100pruR.vs..MB100.rep.4
MB100pruR.vs..MB100.rep.2
MB100pruR.vs..MB100.rep.1
stphcy5plogcy3slide487norm
stphcy5plogcy3slide580norm
X3dbfcy5plogcy3slide601norm
Biological.replicate.4.of.7..falcarinol.treatment
Biological.replicate.6.of.7..ethambutol.treatment
X4dbfcy5plogcy3slide901norm
Biological.replicate.4.of.6..negative.control
dosR.WT_Replicate2
Biological.replicate.2.of.7..panaxydol.treatment
dosR.WT_Replicate4
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
Biological.replicate.2.of.7..falcarinol.treatment
Biological.replicate.1.of.7..panaxydol.treatment
Biological.replicate.3.of.6..negative.control
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
stphcy3plogcy5slide581norm
WT.with.vs..without.N_dye.swap_rep1
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.5.of.7..ethambutol.treatment
Bedaquiline.vs..DMSO.60min
WT.vs..DglnR.N_starvation_dye.swap_rep1
Biological.replicate.7.of.7..panaxydol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
WT.vs..DglnR.N_starvation_rep1
WT.vs..DglnR.N_starvation_rep2
X2XR.rep1
X2XR.rep2
Sub.MIC.INH
Bedaquiline.vs..DMSO.15min
Mycobacterium.smegmatis.Spheroplast.induced
BatchCulture_LBTbroth_StationaryPhase_Replicate4
Slow.vs..Fast.Replicate.5
Biological.replicate.7.of.7..falcarinol.treatment
DglnR_without.vs..with.N_rep2
Biological.replicate.6.of.6..kanamycin.treatment
M..smegmatis.Acid.NO.treated
Biological.replicate.4.of.6..kanamycin.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
Biological.replicate.5.of.6..kanamycin.treatment
Biological.replicate.2.of.6..isoniazid.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X4dbfcy5plogcy3slide480norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
KO_log.phase_rep2
KO_log.phase_rep1
Wild.type.rep3
Biological.replicate.3.of.7..ethambutol.treatment
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.4
mc2155.vs.Dcrp1.replicate.1
dcpA.knockout.rep2
dcpA.knockout.rep1
Plogcy5plogcy3slide111norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
X4XR.rep1
Slow.vs..Fast.Replicate.4
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Biological.replicate.5.of.6..negative.control
X3dbfcy5plogcy3slide603norm
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
BatchCulture_LBTbroth_StationaryPhase_Replicate2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
Comments
Log in to post comments