Module 478 Residual: 0.54
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.54 | 0.013 | 0.02 | 86 | 16 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.013 | |
| Motif 2 |
 |
| e-value: 0.02 |
| MSMEG_4498 Uncharacterized protein | MSMEG_4327 3-oxoacyl-(Acyl-carrier-protein) synthase 1 KasA (3-oxoacyl-[acyl-carrier-protein] synthase 1) (EC 2.3.1.41) |
| MSMEG_4495 CBS domain protein | MSMEG_4326 Meromycolate extension acyl carrier protein (ACP) |
| MSMEG_4493 GTPase Era | MSMEG_4325 Malonyl CoA-acyl carrier protein transacylase (MCT) (EC 2.3.1.39) |
| MSMEG_4500 Uncharacterized protein | MSMEG_4496 Endoribonuclease YbeY (EC 3.1.-.-) |
| MSMEG_3898 Ectoine hydroxylase (EC 1.-.-.-) (EC 1.14.11.18) | MSMEG_3900 Diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) |
| MSMEG_3899 L-ectoine synthase (EC 4.2.1.108) (N-acetyldiaminobutyrate dehydratase) | MSMEG_3901 L-2,4-diaminobutyric acid acetyltransferase (EC 2.3.1.-) |
| MSMEG_4497 PhoH family protein (PhoH-like protein PhoH1) | MSMEG_4329 Acetyl/propionyl-CoA carboxylase (Beta subunit) AccD6 (EC 6.4.1.3) (Propionyl-CoA carboxylase beta chain) (EC 6.4.1.3) |
| MSMEG_4494 Uncharacterized protein | MSMEG_4328 3-oxoacyl-(Acyl-carrier-protein) synthase 1 KasA (3-oxoacyl-[acyl-carrier-protein] synthase 2) (EC 2.3.1.41) |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
Biological.replicate.4.of.7..ethambutol.treatment
Wild.type.rep2.x
DamtR.with.vs..DamtR.without.N_.rep1
DamtR.with.vs..DamtR.without.N_.rep2
WT.vs..DamtR.N.surplus_rep2
WT.vs..DamtR.N.surplus_rep1
X3dbfcy5plogcy3slide601norm
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.6.of.7..ethambutol.treatment
X4dbfcy5plogcy3slide901norm
Bedaquiline.vs..DMSO.120min
Biological.replicate.4.of.6..negative.control
dosR.WT_Replicate3
dosR.WT_Replicate2
Biological.replicate.2.of.7..panaxydol.treatment
dosR.WT_Replicate4
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.2.of.7..falcarinol.treatment
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
stphcy3plogcy5slide581norm
WT_log.phase_rep1
WT.with.vs..without.N_dye.swap_rep1
WT.with.vs..without.N_dye.swap_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
Biological.replicate.6.of.6..isoniazid.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
WT.vs..DglnR.N_starvation_rep1
WT.vs..DglnR.N_starvation_rep2
MB100pruR.vs..MB100..rep.3
BatchCulture_LBTbroth_StationaryPhase_Replicate4
Biological.replicate.3.of.6..isoniazid.treatment
DglnR_without.vs..with.N_rep1
DglnR_without.vs..with.N_rep2
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.6..kanamycin.treatment
rel.knockout.rep1
M..smegmatis.Acid.NO.treated
Biological.replicate.4.of.6..kanamycin.treatment
Biological.replicate.5.of.6..kanamycin.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
X4dbfcy5plogcy3slide480norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.7.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Wild.type.rep3
Biological.replicate.3.of.7..ethambutol.treatment
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.4
mc2155.vs.Dcrp1.replicate.2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
dcpA.knockout.rep1
Plogcy5plogcy3slide111norm
X2.5..vs..50..air.saturation.Replicate.5
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
X2.5..vs..50..air.saturation.Replicate.3
X4XR.rep2
X4XR.rep1
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.2
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
Biological.replicate.1.of.6..negative.control
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
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