Module 494 Residual: 0.52
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.52 | 8.9e-25 | 0.000000000075 | 80 | 32 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 8.9e-25 | |
| Motif 2 |
 |
| e-value: 0.000000000075 |
| MSMEG_5559 Metabolite/sugar transport protein | MSMEG_0118 Uncharacterized protein |
| MSMEG_5813 Carveol dehydrogenase (EC 1.1.1.275) (Short-chain dehydrogenase/reductase SDR) | MSMEG_4084 Putative acyl-CoA dehydrogenase |
| MSMEG_6882 LysR-family protein transcriptional regulator (Transcriptional regulator, LysR family) | MSMEG_0117 Alpha/beta hydrolase fold protein (EC 3.8.1.5) (Hydrolase) |
| MSMEG_5244 LuxR family two-component response regulator (Two component transcriptional regulatory protein devr) | MSMEG_3366 Isonitrile hydratase, putative (ThiJ/PfpI) |
| MSMEG_6884 NADP oxidoreductase coenzyme F420-dependent (NADP oxidoreductase, coenzyme f420-dependent:6-phosphogluconate dehydrogenase, nad-binding, putative) | MSMEG_2130 Acyl-CoA dehydrogenase FadE14 (Putative acyl-CoA dehydrogenase) |
| MSMEG_5462 RarD protein (RarD protein, DMT superfamily transporter) (EC 5.3.1.1) | MSMEG_2131 AMP-dependent synthetase and ligase (EC 6.2.1.20) (Acyl-CoA synthase) |
| MSMEG_6563 Dihydrokaempferol 4-reductase (NAD-dependent epimerase/dehydratase) | MSMEG_2132 Acyl carrier protein Acp (Acyl carrier protein mbtL) |
| MSMEG_6562 Acyl-CoA dehydrogenase FadE6_1 (Putative acyl-CoA dehydrogenase) | MSMEG_2133 Uncharacterized protein |
| MSMEG_3113 Carbohydrate kinase, FGGY (EC 2.7.1.17) (Carbohydrate kinase, fggy) | MSMEG_4165 Benzaldehyde dehydrogenase II (EC 1.2.1.28) ([NAD+] benzaldehyde dehydrogenase) |
| MSMEG_3112 Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.100) | MSMEG_6780 Phenazine biosynthesis protein PhzF |
| MSMEG_3114 Photosystem I assembly BtpA (Uncharacterized protein) | MSMEG_6561 Nonspecific lipid-transfer protein |
| MSMEG_5245 Universal stress protein family protein (UspA) | MSMEG_6560 Acyl dehydratase (Uncharacterized protein) |
| MSMEG_6564 Transcriptional regulator, TetR family (Transcriptional regulator, TetR family protein) | MSMEG_0107 Cell envelope-related function transcriptional attenuator common domain (Putative transcriptional regulator) |
| MSMEG_2334 | MSMEG_0104 LysR-family transcriptional regulator (Transcriptional regulator, LysR family protein) |
| MSMEG_2332 | MSMEG_0025 Conserved membrane protein (Uncharacterized protein) |
| MSMEG_2531 GntR family protein transcriptional regulator (GntR-family transcription regulator) | MSMEG_5246 Uncharacterized protein |
Wild.type.rep1.y
KO_stationary.phase_rep2
Wild.type.rep2.y
WT.vs..DamtR.without.N_rep2
Biological.replicate.4.of.6..isoniazid.treatment
Plogcy5plogcy3slide110norm
Bedaquiline.vs..DMSO.30min
WT.with.vs..without.N_dye.swap_rep1
Biological.replicate.1.of.6..negative.control
Biological.replicate.5.of.6..negative.control
Biological.replicate.4.of.6..kanamycin.treatment
KO_log.phase_rep1
WT.vs..DamtR.N.surplus_dyeswap_rep2
Wild.type.rep1.x
Biological.replicate.7.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.6..isoniazid.treatment
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
rel.knockout.rep1
dosR.WT_Replicate4
Biological.replicate.5.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
X0.6..vs..50..air.saturation.Replicate.4
Biological.replicate.2.of.7..falcarinol.treatment
mc2155.vs.Dcrp1.replicate.2
stphcy5plogcy3slide487norm
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.1.of.7..panaxydol.treatment
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
Biological.replicate.2.of.6..isoniazid.treatment
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.5
Biological.replicate.2.of.7..ethambutol.treatment
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
WT.with.vs..without.N_dye.swap_rep2
WT_stationary.phase_rep1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
Biological.replicate.5.of.7..ethambutol.treatment
Wild.type.rep2.x
Slow.vs..Fast.Replicate.5
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
Biological.replicate.5.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.vs..DglnR.N_starvation_rep1
Bedaquiline.vs..DMSO..45min
WT.vs..DglnR.N_starvation_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X2XR.rep2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Biological.replicate.3.of.6..negative.control
WT.vs..DamtR.N.surplus_rep2
WT.vs..DglnR.N_starvation_dye.swap_rep1
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