Module 497 Residual: 0.53
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.53 | 1.2e-18 | 0.0000000000000067 | 79 | 30 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 1.2e-18 | |
| Motif 2 |
 |
| e-value: 0.0000000000000067 |
| MSMEG_6095 D-amino acid deaminase | MSMEG_5266 RDD family protein |
| MSMEG_6094 Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) | MSMEG_0464 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase (Phosphomethylpyrimidine kinase) (EC 2.7.4.7) |
| MSMEG_0951 Glutaredoxin 2 | MSMEG_6625 Glyoxalase family protein (Glyoxalase/bleomycin resistance protein/dioxygenase) |
| MSMEG_0949 HAD-superfamily protein subfamily protein IB hydrolase, TIGR01490 | MSMEG_6626 Short-chain dehydrogenase/reductase SDR (EC 1.1.1.-) |
| MSMEG_6429 Uncharacterized protein | MSMEG_6627 Nitroreductase (Nitroreductase family protein) |
| MSMEG_5188 Abortive infection protein (Caax amino protease family protein) | MSMEG_0795 ABC transporter ATP-binding protein |
| MSMEG_5189 NAD-dependent epimerase/dehydratase (EC 4.2.1.46) (Oxidoreductase) | MSMEG_6384 Catalase-peroxidase 1 (CP 1) (EC 1.11.1.21) (Peroxidase/catalase 1) |
| MSMEG_4405 Putative ECF sigma factor RpoE1 | MSMEG_1983 Major facilitator family protein transporter (Major facilitator superfamily MFS-1) |
| MSMEG_3466 Uncharacterized protein | MSMEG_2013 Oxidoreductase, short chain dehydrogenase/reductase family protein (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.100) |
| MSMEG_1382 MmpL5 protein (Transmembrane transport protein MmpL1) | MSMEG_0466 Uncharacterized protein |
| MSMEG_1381 MmpS5 protein | MSMEG_5867 Nuclear transport factor 2 (Nuclear transport factor 2 (NTF2) domain superfamily protein) |
| MSMEG_1532 Antibiotic biosynthesis monooxygenase | MSMEG_5866 Alcohol dehydrogenase B (Zinc-containing alcohol dehydrogenase NAD dependent adhB) (EC 1.1.1.1) |
| MSMEG_1534 Probable conserved membrane protein | MSMEG_5869 Putative short chain dehydrogenase (Short-chain dehydrogenase/reductase SDR) |
| MSMEG_3495 MmpS5 protein | MSMEG_1799 Transcriptional regulator (Transcriptional regulator LysR family) |
| MSMEG_3496 MmpL4 protein (Transmembrane transport protein MmpL1) | MSMEG_1798 Major facilitator superfamily protein |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
KO_log.phase_rep1
Wild.type.rep3
Mycobacterium.smegmatis.Spheroplast.induced
Wild.type.rep2.x
Biological.replicate.4.of.7..ethambutol.treatment
Bedaquiline.vs..DMSO.30min
WT.with.vs..without.N_dye.swap_rep1
X2XR.rep1
MB100pruR.vs..MB100..rep.3
Wild.type.rep2.y
Plogcy5plogcy3slide110norm
Wild.type.rep1.x
Wild.type.rep1.y
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Bedaquiline.vs..DMSO.60min
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.1.of.6..negative.control
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
Biological.replicate.5.of.6..kanamycin.treatment
X3dbfcy5plogcy3slide601norm
Sub.MIC.INH
Biological.replicate.6.of.7..ethambutol.treatment
WT.vs..DamtR.N.surplus_rep1
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
stphcy5plogcy3slide487norm
Slow.vs..Fast.Replicate.3
WT.vs..DamtR.N.surplus_rep2
Biological.replicate.5.of.7..panaxydol.treatment
Biological.replicate.2.of.6..isoniazid.treatment
X4dbfcy5plogcy3slide480norm
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
Biological.replicate.4.of.7..panaxydol.treatment
X3dbfcy5plogcy3slide603norm
X2.5..vs..50..air.saturation.Replicate.3
Biological.replicate.2.of.6..kanamycin.treatment
WT_stationary.phase_rep1
Biological.replicate.1.of.7..ethambutol.treatment
X4XR.rep2
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.5.of.7..ethambutol.treatment
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_dye.swap_rep2
mc2155.vs.Dcrp1.replicate.1
Slow.vs..Fast.Replicate.2
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_rep1
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X2XR.rep2
WT.vs..DglnR.N_starvation_dye.swap_rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
Plogcy5plogcy3slide113norm
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.3.of.6..negative.control
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