Module 519 Residual: 0.45
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.45 | 0.0000000000016 | 0.0028 | 88 | 19 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000000000016 | |
| Motif 2 |
 |
| e-value: 0.0028 |
| MSMEG_3281 Spermidine/putrescine import ATP-binding protein PotA (EC 3.6.3.31) | MSMEG_5855 Uncharacterized protein |
| MSMEG_3279 Polyamine ABC transporter permease protein | MSMEG_5858 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100) (Short-chain dehydrogenase/reductase SDR) |
| MSMEG_5861 Cytochrome P450 109 (EC 1.14.-.-) (Cytochrome P450 CYP123) | MSMEG_5859 Aldehyde dehydrogenase (NAD) family protein (EC 1.2.1.-) (Putative aldehyde dehydrogenase AldA) |
| MSMEG_5860 Transcriptional regulator, TetR family (Transcriptional regulator, TetR family protein) | MSMEG_5857 6-phosphogluconate dehydrogenase, NAD-binding protein (EC 1.1.1.60) (Putative oxidoreductase) (EC 1.1.-.-) |
| MSMEG_0968 Cytochrome P450 | MSMEG_2558 Cytochrome P450 124 cyp124 (EC 1.14.13.151) (NikQ protein) |
| MSMEG_3280 ABC transporter solute-binding protein (Polyamine-binding lipoprotein) | MSMEG_2559 Conserved domain protein (Putative ferredoxin) |
| MSMEG_3964 Pyruvate dehydrogenase (Thiamine pyrophosphate enzyme-like TPP-binding protein) | MSMEG_2557 Putative tetR family regulator (Transcriptional regulator, TetR family protein) |
| MSMEG_3962 L-lactate 2-monooxygenase (Lactate 2-monooxygenase) (EC 1.13.12.4) | MSMEG_3277 Polyamine ABC transporter integral membrane protein |
| MSMEG_5856 4-carboxymuconolactone decarboxylase domain protein (EC 4.1.1.44) | MSMEG_0967 Uncharacterized protein |
| MSMEG_3965 Uncharacterized protein |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
Biological.replicate.3.of.7..ethambutol.treatment
Wild.type.rep2.x
MB100pruR.vs..MB100.rep.4
MB100pruR.vs..MB100.rep.2
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..panaxydol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
WT.vs..DamtR.N.surplus_rep2
X3dbfcy5plogcy3slide601norm
X3dbfcy3plogcy5slide607norm
Biological.replicate.4.of.7..falcarinol.treatment
Biological.replicate.6.of.7..ethambutol.treatment
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.without.N_rep1
dcpA.knockout.rep2
Biological.replicate.4.of.6..negative.control
Plogcy5plogcy3slide110norm
Biological.replicate.2.of.7..panaxydol.treatment
dosR.WT_Replicate4
Biological.replicate.6.of.6..negative.control
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.2.of.7..falcarinol.treatment
Biological.replicate.3.of.6..negative.control
stphcy3plogcy5slide581norm
WT.with.vs..without.N_dye.swap_rep1
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.5.of.7..ethambutol.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Sub.MIC.INH
MB100pruR.vs..MB100..rep.3
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.7.of.7..falcarinol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.6..kanamycin.treatment
Biological.replicate.6.of.7..falcarinol.treatment
M..smegmatis.Acid.NO.treated
Biological.replicate.4.of.6..kanamycin.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
Biological.replicate.5.of.6..kanamycin.treatment
WT_stationary.phase_rep1
Biological.replicate.2.of.6..isoniazid.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X4dbfcy5plogcy3slide480norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
Plogcy5plogcy3slide113norm
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
KO_log.phase_rep2
KO_log.phase_rep1
Wild.type.rep1.x
WT.vs..DamtR.without.N_.dyeswap_rep1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Wild.type.rep3
Biological.replicate.4.of.6..isoniazid.treatment
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.4
mc2155.vs.Dcrp1.replicate.4
Biological.replicate.5.of.7..panaxydol.treatment
Plogcy5plogcy3slide111norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.2
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.5.of.6..negative.control
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
Biological.replicate.1.of.6..negative.control
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
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