Module 520 Residual: 0.54
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.54 | 0.00000000000001 | 0.02 | 76 | 30 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.00000000000001 | |
| Motif 2 |
 |
| e-value: 0.02 |
| MSMEG_1731 IS6120, transposase (Transposase, mutator type) | MSMEG_1148 MCE-family protein Mce6F (Mce related protein) |
| MSMEG_6348 Uncharacterized protein | MSMEG_1144 MCE-family protein Mce6B (Virulence factor Mce family protein) |
| MSMEG_3568 BFD domain protein (2Fe-2S)-binding domain protein (Uncharacterized protein) | MSMEG_1146 Virulence factor Mce family protein |
| MSMEG_6294 Caib/baif family protein (L-carnitine dehydratase/bile acid-inducible protein F) (EC 2.8.3.16) | MSMEG_1141 ABC-transporter integral membrane protein (YrbE family protein, YrbE5A) |
| MSMEG_2447 Purine catabolism PurC-like protein (Regulatory protein) | MSMEG_1142 ABC-transporter integral membrane protein (Conserved hypothetical integral membrane protein YrbE6B) |
| MSMEG_4876 AMP-dependent synthetase and ligase (Acyl-CoA synthase) | MSMEG_4123 3-hydroxyisobutyrate dehydrogenase (6-phosphogluconate dehydrogenase NAD-binding (3-hydroxyisobutyrate dehydrogenase)) (EC 1.1.1.31) |
| MSMEG_3783 Acyl-CoA dehydrogenase (EC 1.3.99.-) | MSMEG_4122 Major facilitator family protein transporter (Major facilitator superfamily MFS_1) |
| MSMEG_2104 GntR-family protein transcriptional regulator (Uncharacterized protein) | MSMEG_1060 Putative Lsr2 protein (Uncharacterized protein) |
| MSMEG_6295 Shikimate transporter (Uncharacterized protein) | MSMEG_0467 Lysine exporter protein (LYSE/YGGA) (Membrane transport protein) |
| MSMEG_0889 Aldehyde dehydrogenase | MSMEG_0469 GCN5-related N-acetyltransferase (Transcriptional regulatory protein PadR) |
| MSMEG_2141 Gp35 protein | MSMEG_3487 Metal dependent phosphohydrolase (EC 4.2.1.69) (Metal-dependent phosphohydrolase) |
| MSMEG_2140 Fic protein family protein | MSMEG_2449 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) |
| MSMEG_0559 Cold shock protein A cspA (Conserved domain protein) | MSMEG_0433 Integral membrane nitrite extrusion protein NarK1 (Nitrite extrusion protein) |
| MSMEG_6816 Molybdopterin oxidoreductase (EC 1.2.1.2) | MSMEG_3916 Uncharacterized protein |
| MSMEG_2450 Adenosylmethionine--8-amino-7-oxononanoate transaminase (Aminotransferase class-III) (EC 2.6.1.-) | MSMEG_3488 Transcriptional regulator, AraC family protein |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.4.of.6..negative.control
Bedaquiline.vs..DMSO.15min
M..smegmatis.Acid.NO.treated
Mycobacterium.smegmatis.Spheroplast.induced
dosR.WT_Replicate4
Biological.replicate.5.of.6..isoniazid.treatment
MB100pruR.vs..MB100..rep.3
KO_log.phase_rep2
Biological.replicate.7.of.7..falcarinol.treatment
Wild.type.rep1.x
Wild.type.rep1.y
Biological.replicate.3.of.7..panaxydol.treatment
MB100pruR.vs..MB100.rep.1
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X3dbfcy5plogcy3slide601norm
Biological.replicate.4.of.6..kanamycin.treatment
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
Biological.replicate.2.of.7..falcarinol.treatment
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
Biological.replicate.5.of.6..kanamycin.treatment
Slow.vs..Fast.Replicate.3
Biological.replicate.2.of.7..ethambutol.treatment
mc2155.vs.Dcrp1.replicate.4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
Biological.replicate.2.of.6..isoniazid.treatment
WT_log.phase_rep2
X2.5..vs..50..air.saturation.Replicate.5
X3dbfcy3plogcy5slide607norm
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.5.of.7..ethambutol.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Slow.vs..Fast.Replicate.5
Biological.replicate.2.of.6..kanamycin.treatment
mc2155.vs.Dcrp1.replicate.1
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
dosR.WT_Replicate3
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.vs..DglnR.N_starvation_rep2
Wild.type.rep2.x
X2XR.rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Biological.replicate.3.of.6..kanamycin.treatment
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..negative.control
Biological.replicate.3.of.6..negative.control
Biological.replicate.1.of.6..kanamycin.treatment
Bedaquiline.vs..DMSO.120min
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